Gene
RNA
| Item | Value |
|---|---|
| gene id | G1752637 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 54025049 ~ 54026533 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2006716 | False | 239 | lncRNA | 0.61 | 3 | 54025049 | 54026533 |
| TU2006715 | True | 289 | lncRNA | 0.59 | 2 | 54025647 | 54026533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500727 | LOC106608576 | coding | upstream | 133722 | 53736004 ~ 53891327 (+) |
| LOC118942947 | NA | coding | upstream | 251724 | 53769687 ~ 53773325 (+) |
| LOC110500725 | LOC106608581 | coding | upstream | 520023 | 53500123 ~ 53505026 (+) |
| LOC110500724 | LOC106608582 | coding | upstream | 606691 | 53406046 ~ 53418358 (+) |
| rab1ba | LOC100695098 | coding | upstream | 657936 | 53348513 ~ 53367113 (+) |
| LOC110500729 | md2l1 | coding | downstream | 40919 | 54067452 ~ 54070543 (+) |
| si:dkey-219e21.4 | LOC106608570 | coding | downstream | 173189 | 54199722 ~ 54202902 (+) |
| LOC110500735 | ablim2 | coding | downstream | 179950 | 54206483 ~ 54342581 (+) |
| LOC110500891 | afap1 | coding | downstream | 322811 | 54349344 ~ 54508277 (+) |
| LOC110500744 | grpel1 | coding | downstream | 929014 | 54955547 ~ 54960002 (+) |
| G1752383 | NA | non-coding | upstream | 132072 | 53891413 ~ 53892977 (+) |
| G1752565 | NA | non-coding | upstream | 142637 | 53881564 ~ 53882412 (+) |
| G1752563 | NA | non-coding | upstream | 144673 | 53879941 ~ 53880376 (+) |
| G1752501 | NA | non-coding | upstream | 283551 | 53741205 ~ 53741498 (+) |
| G1752494 | NA | non-coding | upstream | 297350 | 53726894 ~ 53727699 (+) |
| G1752647 | NA | non-coding | downstream | 23452 | 54049985 ~ 54050230 (+) |
| G1752639 | NA | non-coding | downstream | 45617 | 54072150 ~ 54074167 (+) |
| G1752664 | NA | non-coding | downstream | 61151 | 54087684 ~ 54089685 (+) |
| G1752724 | NA | non-coding | downstream | 170518 | 54197051 ~ 54197649 (+) |
| G1752782 | NA | non-coding | downstream | 295501 | 54322034 ~ 54323207 (+) |
| LOC110500722 | NA | other | upstream | 768448 | 53251413 ~ 53256660 (+) |
| G1751699 | LOC106608599 | other | upstream | 1052666 | 52962449 ~ 52972383 (+) |
| G1750050 | NA | other | upstream | 1828042 | 52191200 ~ 52197007 (+) |
| G1750030 | LOC106608688 | other | upstream | 1929944 | 52094709 ~ 52095105 (+) |
| G1750012 | NA | other | upstream | 1946047 | 52071600 ~ 52079002 (+) |
| G1753100 | NA | other | downstream | 975046 | 55001579 ~ 55011678 (+) |
| LOC110500754 | LOC106591080 | other | downstream | 1564072 | 55590450 ~ 55592100 (+) |
| G1755158 | NA | other | downstream | 2359874 | 56386407 ~ 56387622 (+) |
| G1755570 | NA | other | downstream | 2767198 | 56793731 ~ 56794574 (+) |
