G1752664


Basic Information

Item Value
gene id G1752664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 54087684 ~ 54089685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2006744
CAAGGCCACTGTGGTGTGTTAAGGAATCCTGATTAAGAGGGTGGTGAGCTGTTGTTATGAatgtataaacacacatatatgtactcacacacatacaggcatgtgcacatacatgcacatagtcacgtatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccttgtattTCATCTGGAAGTTCTGGACTAGGTTGAGGTCTACAAACATGCGTATGGTGGCCTGAGTGGTCTCAGCGTCGGACAGCTCAAAGTCACTGAAACTGAACTCCATCAGACGCAGAGACTGGGCCGACGGAACAGTGGCCATCttcacaaacagagagaggagtg

Function

NR:

description
cGMP-specific 3',5'-cyclic phosphodiesterase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2006744 True 378 lncRNA 0.48 2 54087684 54089685

Neighbor

gene id symbol gene type direction distance location
LOC110500729 md2l1 coding upstream 17141 54067452 ~ 54070543 (+)
LOC110500727 LOC106608576 coding upstream 196357 53736004 ~ 53891327 (+)
LOC118942947 NA coding upstream 314359 53769687 ~ 53773325 (+)
LOC110500725 LOC106608581 coding upstream 582658 53500123 ~ 53505026 (+)
LOC110500724 LOC106608582 coding upstream 669326 53406046 ~ 53418358 (+)
si:dkey-219e21.4 LOC106608570 coding downstream 110037 54199722 ~ 54202902 (+)
LOC110500735 ablim2 coding downstream 116798 54206483 ~ 54342581 (+)
LOC110500891 afap1 coding downstream 259659 54349344 ~ 54508277 (+)
LOC110500744 grpel1 coding downstream 865862 54955547 ~ 54960002 (+)
ccdc96 ccdc96 coding downstream 876549 54966234 ~ 54968068 (+)
G1752639 NA non-coding upstream 13517 54072150 ~ 54074167 (+)
G1752647 NA non-coding upstream 37454 54049985 ~ 54050230 (+)
G1752637 NA non-coding upstream 61151 54025049 ~ 54026533 (+)
G1752383 NA non-coding upstream 194707 53891413 ~ 53892977 (+)
G1752565 NA non-coding upstream 205272 53881564 ~ 53882412 (+)
G1752724 NA non-coding downstream 107366 54197051 ~ 54197649 (+)
G1752782 NA non-coding downstream 232349 54322034 ~ 54323207 (+)
G1752727 NA non-coding downstream 254402 54344087 ~ 54348175 (+)
G1752798 NA non-coding downstream 270841 54360526 ~ 54360979 (+)
G1752814 NA non-coding downstream 324491 54414176 ~ 54415043 (+)
LOC110500722 NA other upstream 831083 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 1115301 52962449 ~ 52972383 (+)
G1750050 NA other upstream 1890677 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 1992579 52094709 ~ 52095105 (+)
G1750012 NA other upstream 2008682 52071600 ~ 52079002 (+)
G1753100 NA other downstream 911894 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 1500920 55590450 ~ 55592100 (+)
G1755158 NA other downstream 2296722 56386407 ~ 56387622 (+)
G1755570 NA other downstream 2704046 56793731 ~ 56794574 (+)

Expression


Co-expression Network