G1752782


Basic Information

Item Value
gene id G1752782
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 54322034 ~ 54323207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2006879
tctatcactacatccatccatctatatacataatctatcactacatccatccatctatatacaTTATCTTTCACTACATCCATCATccatctacatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatatATTATCTTTCACTACATCCATCATccatctacatacagtatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctacatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagAATCTATCattacatccatccatctatatacagtatctatcactacatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagaatctatcactacatccatccatctatatacagAATCTATCattacatccatccatctatatacagtatctatcactacatccatccatctatatacagtatctataactacatccatctatatacagtatctatcactacatccatccatctatatac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592871

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2006879 True 1017 lncRNA 0.33 2 54322034 54323207

Neighbor

gene id symbol gene type direction distance location
si:dkey-219e21.4 LOC106608570 coding upstream 119132 54199722 ~ 54202902 (+)
LOC110500729 md2l1 coding upstream 251491 54067452 ~ 54070543 (+)
LOC110500727 LOC106608576 coding upstream 430707 53736004 ~ 53891327 (+)
LOC118942947 NA coding upstream 548709 53769687 ~ 53773325 (+)
LOC110500725 LOC106608581 coding upstream 817008 53500123 ~ 53505026 (+)
LOC110500891 afap1 coding downstream 26137 54349344 ~ 54508277 (+)
LOC110500744 grpel1 coding downstream 632340 54955547 ~ 54960002 (+)
ccdc96 ccdc96 coding downstream 643027 54966234 ~ 54968068 (+)
LOC110500741 LOC106595343 coding downstream 659585 54982792 ~ 54986995 (+)
smim20 NA coding downstream 808761 55131968 ~ 55133176 (+)
G1752724 NA non-coding upstream 124385 54197051 ~ 54197649 (+)
G1752664 NA non-coding upstream 232349 54087684 ~ 54089685 (+)
G1752639 NA non-coding upstream 247867 54072150 ~ 54074167 (+)
G1752647 NA non-coding upstream 271804 54049985 ~ 54050230 (+)
G1752637 NA non-coding upstream 295501 54025049 ~ 54026533 (+)
G1752727 NA non-coding downstream 20880 54344087 ~ 54348175 (+)
G1752798 NA non-coding downstream 37319 54360526 ~ 54360979 (+)
G1752814 NA non-coding downstream 90969 54414176 ~ 54415043 (+)
G1752853 NA non-coding downstream 190420 54513627 ~ 54515753 (+)
G1752942 NA non-coding downstream 380862 54704069 ~ 54704901 (+)
LOC110500735 ablim2 other upstream 14544 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 1065433 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 1349651 52962449 ~ 52972383 (+)
G1750050 NA other upstream 2125027 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 2226929 52094709 ~ 52095105 (+)
G1753100 NA other downstream 678372 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 1267398 55590450 ~ 55592100 (+)
G1755158 NA other downstream 2063200 56386407 ~ 56387622 (+)
G1755570 NA other downstream 2470524 56793731 ~ 56794574 (+)
G1756789 NA other downstream 3603273 57926480 ~ 57928244 (+)

Expression


Co-expression Network