LOC110501956 (itgav)


Basic Information

Item Value
gene id LOC110501956
gene name itgav
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 48139761 ~ 48220042 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959466.1
tccaaaAACTCGATGCCTCTCTGTTTACAAGTGAACTATTTCGTTGTAAGCCAGTTGTTACCCAGTAGCCCCGTACATGGCTATGGAACGGGCGATGAGGGAATAGAACTGCTGTTGGGATAGTGTGAAACATTGCGGAAGTCTTTTTTTTAATAGGGAACAACGCTCTCACTTCCTGTACAGTTGGTTTTTAGGACTACTAAACACAAAACATCGCTGTTGGCTACTGAGGTGTGTGTTGCCATTTAACACAGATTGGTTACATTGTATCGCTTGAATCGTGGATTTAAGGACGCGATCTGATTCGAACTGGAATCTTCTCATCGGAAAGAAGAAGAAGTGAAAGTTTGTAGCCGTGAGCGGTTTTGCTGAGCTGGTTCGAGTTAACATGCACATGGTGTGTGGGATGTCACTGTATCGTCATTAGAACGACTACAAAGAGAAAAGGGGAACTCATCACAGTAGTGTATTATCGCCAGACTAaaacacgccacacacacacacacacagttaaggcTTGCTACTCTACTGAGCACTTCAGGATGGAACGACTTCGAAAACTTTGTATATCTTTGTCTTTGATCCTGCCCTGTTTACAATGGACAACTTGTTTCAATCTGGACATTGACAAGCCCTATGTATTCTCTGGTCCTGAAGGAAGTTATTTTGGATTTTCTGTGGATTTCTTCCAGCCAGATGCCAAGCAGTCAAACATTCTTATAGGAgctcccaaagccaacacctcatcaGCTTCTACAGTGGTGGAGCGAGGGGCAGTCTATACCTGCCCATGGCAGAAGAGTAGTGACTGTACCCAAGTACAGTTTGACAATACTGATGATCGTAAGAATAACGAGGGGCTCCAGATGGAATTTAAGTCCAACCAGTGGTTTGGTGCCACGGTACGGTCACATGGTGAACACATCCTGgcctGTGCTCCTCTCTACCAGTGGAGCACGTAcagcgtgtcagagagagagcCTGTTGGAACGTGTTTCCTGAAGAAAGGACAAGAAGTTGTGGAGTACTCTCCTTGTCGATCTAAAGCCAACTCTCCAGAGGGACAAGGCTTCTGTCAGGCTGGATTCAGTATTGACTTTGTCAAGaaTAACAGGGTGGTTGTTGGAGGCCCTGGTAGTTTCTACTGGCAAGGTCAGCTGATAAGTGATGATATCTCTGAGATCATCACCAGGTTCAATAGACAATACTACACTCCTTACAGTAACCAGCTGACCACTAAGTCTGCCAGCGCTCAGTACGATGACAGCTATTTAGGTTATTCTGTGACTGTCGGTGACTTCAATGCTGATGGAGAAGATGATTACATTACCGGGGTACCCAGGGGAGACAAAGCTCTGGGCTATGTGAACATCTTCAATGGGAGGAATATGCAGTCTGTCCTGAACTTCACAGGAACACAGATGGCTGCCTACTTCGGCCATTCTGTGGCAGCGACCGACATCAATAACGATGGgctggtGGATCTGTTTGTAGGGGCCCCTCTGTTCATGGACCGTGGTAGTGATGGGAAGCTAAGGGAGGTGGGTCAGGTGTCTGTGTTCCTGGGGAAAGGAGGCTTCTCCTTCAACACACCCATCACACTGAGTGGGACAGAGATCTACTCACGCTTCGGCAGTTCTATCGCCACCCTGGGGGACCTGGATATGGATGGCTTCAACGACATTGCCATAGCTGCACCCTACGGCGGGCCGAAGCACAGGGGCCTAGTGTATATCCACAATGGGAGGGCTGCAGGGCCTGACCCAGTGCCTTCTCAGGTCCTAGAGGGGAGGTGGGCCTCCTCTTACATGCCCCCCAGCTTTGGATACTCGCTGCACGGAGCCACCGATATTGACCAGAATGGATACCCAGACTTAATAGTGGGTGTATTTGGTGCAGACAAAGCCGTTCTATACAGggctcGGCCCGTTATCAGTGTTAACGCCACCCTGGACATcagccctcagatcctcaacccAGAGGAAAGGAGCTGCAAGCTGCCTGACAGTGACACTAAAGTGTCCTGTTTCAAAGTGAAGTACTGTCTTAAAGCGAGTGGAAGAGGTGCACCAGATTCACTGAAGTTCCAGGTTCACCTTGTCCTGGATAGACTCAAACACAAGGGGGCGACAAAGAGAGTTCTGTTCCTCCACAGCAAAACGTCCCAGTACACGAAAAACATGACGGTCAGCAACGGCCAAGGACCAGCCTGCGAGGAGCAAGAAGCCTTCCTCATAGATGACTCTGAGTTCCGGGACAAGATCACTCCCATCTCTGTGTTCATGGAGTTTAGTCTGGACTACCAGCAGGCAGCAGATAAGACCGGCCTACTGCCTATCCTGGAGCAGACTACCCCCACCAACATCTCCAAACAGGCCCATGTCCTTCTGGACTGTGGAGATGACAACATCTGCAAGCCAGACCTCAAGCTGTCTGTAGTGAGTGACCAGAAGCAGATCTACATAGGAGATGATAACCCCTTGACCCTGGAGGTGACAgcggagaacagaggagagggggcGTACGAGGCAGAGCTACATGTCTTCCTTCCTCCCCAGGCTGACTTCACTGGGGTCGTACGCAACAGTGAGACTCTGTCAAGATTGTCCTGTGCATACAAGACAGAGAACCAGACCAGGGTGGTGGTGTGTGACCTGGGGAACCCCATGAAAGGAGGAATTAAGGTGCTGGCCGGACTCCGCTTCAGTGTTCATCAGCTCTCAGAGCAGGACACGTTGGTGAAGTTTGACCTGCAGATACAGAGTTCCAACCAGTTCAACAgcaccagcagtctggtctccAGCATCACAACGCTGGCTGTTCTGGCCAATGTGGATTTCAGAGGGGTGGCGCTTCCTGACCAGGTCTTCCTGCCCATCGCTAACTGGAAGTCCAAAGAGAACCCTGTCGTAGGAGAAGACATCGGTCCACGAATACAGCACATCTATGAGTTGCGTAACAGAGGTCCCAGTACCTTCAGCAAGGCCATACTGGACATCGAGTGGCCCTACAGGTTCAACAACGGCTCTCTGCTCTACATCACTGAACTAGAGGTGGACAGAGGCATGAACTGCAGTACAGACATGGAGATCAACCCACTCAATGTCTCAAATCCTTTGTCAACAGAGACAAATGGTTCAGCTTCCACCAGTGGAGACAATACAGAAGGGAGGAACAGGAACCATGTTCACCGCAGAGAGCTGGcgaagaaagagatggagggagaactgGAAACTCTGGACTGTTCCAAGGCCCAGTGCCTGAAGATCCGGTGTCAGGTGGGCCGTGTGGAGAGAGGTCAGAGTACCACCCTGTACGTCCACTCCAGACTGGGGGTGGCCACCTTCCTCAAGACTGAGAGCCAGAACCGATCGTTCACCGTGAGATCCTCCGCTTCCTTCAGCGTCATAGAGATGCCTTATAACAAGAACCTGGTGTCTGAGCTGCCCTCCAACGCAATTACGGTGAGTATGTCAGTGATCTGGTTGAAATCTGATCCTGAACCTGTTCCCGGGTGGGTGGTGGCGCTGGCTGTGCTGGCTGGACTACTGCTGCTGGCTCTGCTAATCTTCATCATGTATAAGctggGGTTCTTCAAGCGTGTACGCCCCCCTCAGGAGGACAACACGGAGAAGGAACAGCTGGCACCGCAGGAGAACGGTGACAGGAACAATGAAGCCTGAGACCTCCAGCAACCCCCGGAGGTCTCCAGACTTCAATGCAACACCAGGACCTGCATCTACACACTATCTCTCACGAGTAGAACATTTTGCAAATCAAAAAAAATTAAATCACATCTAGCCAGCAGATATTTAGGAGACCTCAtgagctgtcctaaccagttaCCAGTTACCAGTTGGTGTCTTGATAATAGAAAAAGGCAGCTTAGTCAGTGGTTCCTGACCCATAGACAGGTTCCTGAGCCATAGACAGGTTCCTGCACCATAGACAGTCAATTGATTTTGAGTTGAAAGAATGTTTAGCTATTTCTATGATCAACCCATACATAATCTATCGCTATTGACAATGATTTCACAAGAGGCCTAATTCACATGATATGACTCAATAACTATAGCCACTAatgcagggctgcccaaccctcttcctggagaactaGTGTCCTGTaggttcagtccaaccctcttcctggagatctactgtcctgtaggttatcagtccaaccctccaggaagagggttggactgatcaa
>XM_036959467.1
tccaaaAACTCGATGCCTCTCTGTTTACAAGTGAACTATTTCGTTGTAAGCCAGTTGTTACCCAGTAGCCCCGTACATGGCTATGGAACGGGCGATGAGGGAATAGAACTGCTGTTGGGATAGTGTGAAACATTGCGGAAGTCTTTTTTTTAATAGGGAACAACGCTCTCACTTCCTGTACAGTTGGTTTTTAGGACTACTAAACACAAAACATCGCTGTTGGCTACTGAGGTGTGTGTTGCCATTTAACACAGATTGGTTACATTGTATCGCTTGAATCGTGGATTTAAGGACGCGATCTGATTCGAACTGGAATCTTCTCATCGGAAAGAAGAAGAAGTGAAAGTTTGTAGCCGTGAGCGGTTTTGCTGAGCTGGTTCGAGTTAACATGCACATGGAAGTTATTTTGGATTTTCTGTGGATTTCTTCCAGCCAGATGCCAAGCAGTCAAACATTCTTATAGGAgctcccaaagccaacacctcatcaGCTTCTACAGTGGTGGAGCGAGGGGCAGTCTATACCTGCCCATGGCAGAAGAGTAGTGACTGTACCCAAGTACAGTTTGACAATACTGATGATCGTAAGAATAACGAGGGGCTCCAGATGGAATTTAAGTCCAACCAGTGGTTTGGTGCCACGGTACGGTCACATGGTGAACACATCCTGgcctGTGCTCCTCTCTACCAGTGGAGCACGTAcagcgtgtcagagagagagcCTGTTGGAACGTGTTTCCTGAAGAAAGGACAAGAAGTTGTGGAGTACTCTCCTTGTCGATCTAAAGCCAACTCTCCAGAGGGACAAGGCTTCTGTCAGGCTGGATTCAGTATTGACTTTGTCAAGaaTAACAGGGTGGTTGTTGGAGGCCCTGGTAGTTTCTACTGGCAAGGTCAGCTGATAAGTGATGATATCTCTGAGATCATCACCAGGTTCAATAGACAATACTACACTCCTTACAGTAACCAGCTGACCACTAAGTCTGCCAGCGCTCAGTACGATGACAGCTATTTAGGTTATTCTGTGACTGTCGGTGACTTCAATGCTGATGGAGAAGATGATTACATTACCGGGGTACCCAGGGGAGACAAAGCTCTGGGCTATGTGAACATCTTCAATGGGAGGAATATGCAGTCTGTCCTGAACTTCACAGGAACACAGATGGCTGCCTACTTCGGCCATTCTGTGGCAGCGACCGACATCAATAACGATGGgctggtGGATCTGTTTGTAGGGGCCCCTCTGTTCATGGACCGTGGTAGTGATGGGAAGCTAAGGGAGGTGGGTCAGGTGTCTGTGTTCCTGGGGAAAGGAGGCTTCTCCTTCAACACACCCATCACACTGAGTGGGACAGAGATCTACTCACGCTTCGGCAGTTCTATCGCCACCCTGGGGGACCTGGATATGGATGGCTTCAACGACATTGCCATAGCTGCACCCTACGGCGGGCCGAAGCACAGGGGCCTAGTGTATATCCACAATGGGAGGGCTGCAGGGCCTGACCCAGTGCCTTCTCAGGTCCTAGAGGGGAGGTGGGCCTCCTCTTACATGCCCCCCAGCTTTGGATACTCGCTGCACGGAGCCACCGATATTGACCAGAATGGATACCCAGACTTAATAGTGGGTGTATTTGGTGCAGACAAAGCCGTTCTATACAGggctcGGCCCGTTATCAGTGTTAACGCCACCCTGGACATcagccctcagatcctcaacccAGAGGAAAGGAGCTGCAAGCTGCCTGACAGTGACACTAAAGTGTCCTGTTTCAAAGTGAAGTACTGTCTTAAAGCGAGTGGAAGAGGTGCACCAGATTCACTGAAGTTCCAGGTTCACCTTGTCCTGGATAGACTCAAACACAAGGGGGCGACAAAGAGAGTTCTGTTCCTCCACAGCAAAACGTCCCAGTACACGAAAAACATGACGGTCAGCAACGGCCAAGGACCAGCCTGCGAGGAGCAAGAAGCCTTCCTCATAGATGACTCTGAGTTCCGGGACAAGATCACTCCCATCTCTGTGTTCATGGAGTTTAGTCTGGACTACCAGCAGGCAGCAGATAAGACCGGCCTACTGCCTATCCTGGAGCAGACTACCCCCACCAACATCTCCAAACAGGCCCATGTCCTTCTGGACTGTGGAGATGACAACATCTGCAAGCCAGACCTCAAGCTGTCTGTAGTGAGTGACCAGAAGCAGATCTACATAGGAGATGATAACCCCTTGACCCTGGAGGTGACAgcggagaacagaggagagggggcGTACGAGGCAGAGCTACATGTCTTCCTTCCTCCCCAGGCTGACTTCACTGGGGTCGTACGCAACAGTGAGACTCTGTCAAGATTGTCCTGTGCATACAAGACAGAGAACCAGACCAGGGTGGTGGTGTGTGACCTGGGGAACCCCATGAAAGGAGGAATTAAGGTGCTGGCCGGACTCCGCTTCAGTGTTCATCAGCTCTCAGAGCAGGACACGTTGGTGAAGTTTGACCTGCAGATACAGAGTTCCAACCAGTTCAACAgcaccagcagtctggtctccAGCATCACAACGCTGGCTGTTCTGGCCAATGTGGATTTCAGAGGGGTGGCGCTTCCTGACCAGGTCTTCCTGCCCATCGCTAACTGGAAGTCCAAAGAGAACCCTGTCGTAGGAGAAGACATCGGTCCACGAATACAGCACATCTATGAGTTGCGTAACAGAGGTCCCAGTACCTTCAGCAAGGCCATACTGGACATCGAGTGGCCCTACAGGTTCAACAACGGCTCTCTGCTCTACATCACTGAACTAGAGGTGGACAGAGGCATGAACTGCAGTACAGACATGGAGATCAACCCACTCAATGTCTCAAATCCTTTGTCAACAGAGACAAATGGTTCAGCTTCCACCAGTGGAGACAATACAGAAGGGAGGAACAGGAACCATGTTCACCGCAGAGAGCTGGcgaagaaagagatggagggagaactgGAAACTCTGGACTGTTCCAAGGCCCAGTGCCTGAAGATCCGGTGTCAGGTGGGCCGTGTGGAGAGAGGTCAGAGTACCACCCTGTACGTCCACTCCAGACTGGGGGTGGCCACCTTCCTCAAGACTGAGAGCCAGAACCGATCGTTCACCGTGAGATCCTCCGCTTCCTTCAGCGTCATAGAGATGCCTTATAACAAGAACCTGGTGTCTGAGCTGCCCTCCAACGCAATTACGGTGAGTATGTCAGTGATCTGGTTGAAATCTGATCCTGAACCTGTTCCCGGGTGGGTGGTGGCGCTGGCTGTGCTGGCTGGACTACTGCTGCTGGCTCTGCTAATCTTCATCATGTATAAGctggGGTTCTTCAAGCGTGTACGCCCCCCTCAGGAGGACAACACGGAGAAGGAACAGCTGGCACCGCAGGAGAACGGTGACAGGAACAATGAAGCCTGAGACCTCCAGCAACCCCCGGAGGTCTCCAGACTTCAATGCAACACCAGGACCTGCATCTACACACTATCTCTCACGAGTAGAACATTTTGCAAATCAAAAAAAATTAAATCACATCTAGCCAGCAGATATTTAGGAGACCTCAtgagctgtcctaaccagttaCCAGTTACCAGTTGGTGTCTTGATAATAGAAAAAGGCAGCTTAGTCAGTGGTTCCTGACCCATAGACAGGTTCCTGAGCCATAGACAGGTTCCTGCACCATAGACAGTCAATTGATTTTGAGTTGAAAGAATGTTTAGCTATTTCTATGATCAACCCATACATAATCTATCGCTATTGACAATGATTTCACAAGAGGCCTAATTCACATGATATGACTCAATAACTATAGCCACTAatgcagggctgcccaaccctcttcctggagaactaGTGTCCTGTaggttcagtccaaccctcttcctggagatctactgtcctgtaggttatcagtccaaccctccaggaagagggttggactgatcaa
>XM_036959468.1
tccaaaAACTCGATGCCTCTCTGTTTACAAGTGAACTATTTCGTTGTAAGCCAGTTGTTACCCAGTAGCCCCGTACATGGCTATGGAACGGGCGATGAGGGAATAGAACTGCTGTTGGGATAGTGTGAAACATTGCGGAAGTCTTTTTTTTAATAGGGAACAACGCTCTCACTTCCTGTACAGTTGGTTTTTAGGACTACTAAACACAAAACATCGCTGTTGGCTACTGAGGTGTGTGTTGCCATTTAACACAGATTGGTTACATTGTATCGCTTGAATCGTGGATTTAAGGACGCGATCTGATTCGAACTGGAATCTTCTCATCGGAAAGAAGAAGAAGTGAAAGTTTGTAGCCGTGAGCGGTTTTGCTGAGCTGGTTCGAGTTAACATGCACATGGTCAAACATTCTTATAGGAgctcccaaagccaacacctcatcaGCTTCTACAGTGGTGGAGCGAGGGGCAGTCTATACCTGCCCATGGCAGAAGAGTAGTGACTGTACCCAAGTACAGTTTGACAATACTGATGATCGTAAGAATAACGAGGGGCTCCAGATGGAATTTAAGTCCAACCAGTGGTTTGGTGCCACGGTACGGTCACATGGTGAACACATCCTGgcctGTGCTCCTCTCTACCAGTGGAGCACGTAcagcgtgtcagagagagagcCTGTTGGAACGTGTTTCCTGAAGAAAGGACAAGAAGTTGTGGAGTACTCTCCTTGTCGATCTAAAGCCAACTCTCCAGAGGGACAAGGCTTCTGTCAGGCTGGATTCAGTATTGACTTTGTCAAGaaTAACAGGGTGGTTGTTGGAGGCCCTGGTAGTTTCTACTGGCAAGGTCAGCTGATAAGTGATGATATCTCTGAGATCATCACCAGGTTCAATAGACAATACTACACTCCTTACAGTAACCAGCTGACCACTAAGTCTGCCAGCGCTCAGTACGATGACAGCTATTTAGGTTATTCTGTGACTGTCGGTGACTTCAATGCTGATGGAGAAGATGATTACATTACCGGGGTACCCAGGGGAGACAAAGCTCTGGGCTATGTGAACATCTTCAATGGGAGGAATATGCAGTCTGTCCTGAACTTCACAGGAACACAGATGGCTGCCTACTTCGGCCATTCTGTGGCAGCGACCGACATCAATAACGATGGgctggtGGATCTGTTTGTAGGGGCCCCTCTGTTCATGGACCGTGGTAGTGATGGGAAGCTAAGGGAGGTGGGTCAGGTGTCTGTGTTCCTGGGGAAAGGAGGCTTCTCCTTCAACACACCCATCACACTGAGTGGGACAGAGATCTACTCACGCTTCGGCAGTTCTATCGCCACCCTGGGGGACCTGGATATGGATGGCTTCAACGACATTGCCATAGCTGCACCCTACGGCGGGCCGAAGCACAGGGGCCTAGTGTATATCCACAATGGGAGGGCTGCAGGGCCTGACCCAGTGCCTTCTCAGGTCCTAGAGGGGAGGTGGGCCTCCTCTTACATGCCCCCCAGCTTTGGATACTCGCTGCACGGAGCCACCGATATTGACCAGAATGGATACCCAGACTTAATAGTGGGTGTATTTGGTGCAGACAAAGCCGTTCTATACAGggctcGGCCCGTTATCAGTGTTAACGCCACCCTGGACATcagccctcagatcctcaacccAGAGGAAAGGAGCTGCAAGCTGCCTGACAGTGACACTAAAGTGTCCTGTTTCAAAGTGAAGTACTGTCTTAAAGCGAGTGGAAGAGGTGCACCAGATTCACTGAAGTTCCAGGTTCACCTTGTCCTGGATAGACTCAAACACAAGGGGGCGACAAAGAGAGTTCTGTTCCTCCACAGCAAAACGTCCCAGTACACGAAAAACATGACGGTCAGCAACGGCCAAGGACCAGCCTGCGAGGAGCAAGAAGCCTTCCTCATAGATGACTCTGAGTTCCGGGACAAGATCACTCCCATCTCTGTGTTCATGGAGTTTAGTCTGGACTACCAGCAGGCAGCAGATAAGACCGGCCTACTGCCTATCCTGGAGCAGACTACCCCCACCAACATCTCCAAACAGGCCCATGTCCTTCTGGACTGTGGAGATGACAACATCTGCAAGCCAGACCTCAAGCTGTCTGTAGTGAGTGACCAGAAGCAGATCTACATAGGAGATGATAACCCCTTGACCCTGGAGGTGACAgcggagaacagaggagagggggcGTACGAGGCAGAGCTACATGTCTTCCTTCCTCCCCAGGCTGACTTCACTGGGGTCGTACGCAACAGTGAGACTCTGTCAAGATTGTCCTGTGCATACAAGACAGAGAACCAGACCAGGGTGGTGGTGTGTGACCTGGGGAACCCCATGAAAGGAGGAATTAAGGTGCTGGCCGGACTCCGCTTCAGTGTTCATCAGCTCTCAGAGCAGGACACGTTGGTGAAGTTTGACCTGCAGATACAGAGTTCCAACCAGTTCAACAgcaccagcagtctggtctccAGCATCACAACGCTGGCTGTTCTGGCCAATGTGGATTTCAGAGGGGTGGCGCTTCCTGACCAGGTCTTCCTGCCCATCGCTAACTGGAAGTCCAAAGAGAACCCTGTCGTAGGAGAAGACATCGGTCCACGAATACAGCACATCTATGAGTTGCGTAACAGAGGTCCCAGTACCTTCAGCAAGGCCATACTGGACATCGAGTGGCCCTACAGGTTCAACAACGGCTCTCTGCTCTACATCACTGAACTAGAGGTGGACAGAGGCATGAACTGCAGTACAGACATGGAGATCAACCCACTCAATGTCTCAAATCCTTTGTCAACAGAGACAAATGGTTCAGCTTCCACCAGTGGAGACAATACAGAAGGGAGGAACAGGAACCATGTTCACCGCAGAGAGCTGGcgaagaaagagatggagggagaactgGAAACTCTGGACTGTTCCAAGGCCCAGTGCCTGAAGATCCGGTGTCAGGTGGGCCGTGTGGAGAGAGGTCAGAGTACCACCCTGTACGTCCACTCCAGACTGGGGGTGGCCACCTTCCTCAAGACTGAGAGCCAGAACCGATCGTTCACCGTGAGATCCTCCGCTTCCTTCAGCGTCATAGAGATGCCTTATAACAAGAACCTGGTGTCTGAGCTGCCCTCCAACGCAATTACGGTGAGTATGTCAGTGATCTGGTTGAAATCTGATCCTGAACCTGTTCCCGGGTGGGTGGTGGCGCTGGCTGTGCTGGCTGGACTACTGCTGCTGGCTCTGCTAATCTTCATCATGTATAAGctggGGTTCTTCAAGCGTGTACGCCCCCCTCAGGAGGACAACACGGAGAAGGAACAGCTGGCACCGCAGGAGAACGGTGACAGGAACAATGAAGCCTGAGACCTCCAGCAACCCCCGGAGGTCTCCAGACTTCAATGCAACACCAGGACCTGCATCTACACACTATCTCTCACGAGTAGAACATTTTGCAAATCAAAAAAAATTAAATCACATCTAGCCAGCAGATATTTAGGAGACCTCAtgagctgtcctaaccagttaCCAGTTACCAGTTGGTGTCTTGATAATAGAAAAAGGCAGCTTAGTCAGTGGTTCCTGACCCATAGACAGGTTCCTGAGCCATAGACAGGTTCCTGCACCATAGACAGTCAATTGATTTTGAGTTGAAAGAATGTTTAGCTATTTCTATGATCAACCCATACATAATCTATCGCTATTGACAATGATTTCACAAGAGGCCTAATTCACATGATATGACTCAATAACTATAGCCACTAatgcagggctgcccaaccctcttcctggagaactaGTGTCCTGTaggttcagtccaaccctcttcctggagatctactgtcctgtaggttatcagtccaaccctccaggaagagggttggactgatcaa
>XM_036959469.1
tccaaaAACTCGATGCCTCTCTGTTTACAAGTGAACTATTTCGTTGTAAGCCAGTTGTTACCCAGTAGCCCCGTACATGGCTATGGAACGGGCGATGAGGGAATAGAACTGCTGTTGGGATAGTGTGAAACATTGCGGAAGTCTTTTTTTTAATAGGGAACAACGCTCTCACTTCCTGTACAGTTGGTTTTTAGGACTACTAAACACAAAACATCGCTGTTGGCTACTGAGGTCAAACATTCTTATAGGAgctcccaaagccaacacctcatcaGCTTCTACAGTGGTGGAGCGAGGGGCAGTCTATACCTGCCCATGGCAGAAGAGTAGTGACTGTACCCAAGTACAGTTTGACAATACTGATGATCGTAAGAATAACGAGGGGCTCCAGATGGAATTTAAGTCCAACCAGTGGTTTGGTGCCACGGTACGGTCACATGGTGAACACATCCTGgcctGTGCTCCTCTCTACCAGTGGAGCACGTAcagcgtgtcagagagagagcCTGTTGGAACGTGTTTCCTGAAGAAAGGACAAGAAGTTGTGGAGTACTCTCCTTGTCGATCTAAAGCCAACTCTCCAGAGGGACAAGGCTTCTGTCAGGCTGGATTCAGTATTGACTTTGTCAAGaaTAACAGGGTGGTTGTTGGAGGCCCTGGTAGTTTCTACTGGCAAGGTCAGCTGATAAGTGATGATATCTCTGAGATCATCACCAGGTTCAATAGACAATACTACACTCCTTACAGTAACCAGCTGACCACTAAGTCTGCCAGCGCTCAGTACGATGACAGCTATTTAGGTTATTCTGTGACTGTCGGTGACTTCAATGCTGATGGAGAAGATGATTACATTACCGGGGTACCCAGGGGAGACAAAGCTCTGGGCTATGTGAACATCTTCAATGGGAGGAATATGCAGTCTGTCCTGAACTTCACAGGAACACAGATGGCTGCCTACTTCGGCCATTCTGTGGCAGCGACCGACATCAATAACGATGGgctggtGGATCTGTTTGTAGGGGCCCCTCTGTTCATGGACCGTGGTAGTGATGGGAAGCTAAGGGAGGTGGGTCAGGTGTCTGTGTTCCTGGGGAAAGGAGGCTTCTCCTTCAACACACCCATCACACTGAGTGGGACAGAGATCTACTCACGCTTCGGCAGTTCTATCGCCACCCTGGGGGACCTGGATATGGATGGCTTCAACGACATTGCCATAGCTGCACCCTACGGCGGGCCGAAGCACAGGGGCCTAGTGTATATCCACAATGGGAGGGCTGCAGGGCCTGACCCAGTGCCTTCTCAGGTCCTAGAGGGGAGGTGGGCCTCCTCTTACATGCCCCCCAGCTTTGGATACTCGCTGCACGGAGCCACCGATATTGACCAGAATGGATACCCAGACTTAATAGTGGGTGTATTTGGTGCAGACAAAGCCGTTCTATACAGggctcGGCCCGTTATCAGTGTTAACGCCACCCTGGACATcagccctcagatcctcaacccAGAGGAAAGGAGCTGCAAGCTGCCTGACAGTGACACTAAAGTGTCCTGTTTCAAAGTGAAGTACTGTCTTAAAGCGAGTGGAAGAGGTGCACCAGATTCACTGAAGTTCCAGGTTCACCTTGTCCTGGATAGACTCAAACACAAGGGGGCGACAAAGAGAGTTCTGTTCCTCCACAGCAAAACGTCCCAGTACACGAAAAACATGACGGTCAGCAACGGCCAAGGACCAGCCTGCGAGGAGCAAGAAGCCTTCCTCATAGATGACTCTGAGTTCCGGGACAAGATCACTCCCATCTCTGTGTTCATGGAGTTTAGTCTGGACTACCAGCAGGCAGCAGATAAGACCGGCCTACTGCCTATCCTGGAGCAGACTACCCCCACCAACATCTCCAAACAGGCCCATGTCCTTCTGGACTGTGGAGATGACAACATCTGCAAGCCAGACCTCAAGCTGTCTGTAGTGAGTGACCAGAAGCAGATCTACATAGGAGATGATAACCCCTTGACCCTGGAGGTGACAgcggagaacagaggagagggggcGTACGAGGCAGAGCTACATGTCTTCCTTCCTCCCCAGGCTGACTTCACTGGGGTCGTACGCAACAGTGAGACTCTGTCAAGATTGTCCTGTGCATACAAGACAGAGAACCAGACCAGGGTGGTGGTGTGTGACCTGGGGAACCCCATGAAAGGAGGAATTAAGGTGCTGGCCGGACTCCGCTTCAGTGTTCATCAGCTCTCAGAGCAGGACACGTTGGTGAAGTTTGACCTGCAGATACAGAGTTCCAACCAGTTCAACAgcaccagcagtctggtctccAGCATCACAACGCTGGCTGTTCTGGCCAATGTGGATTTCAGAGGGGTGGCGCTTCCTGACCAGGTCTTCCTGCCCATCGCTAACTGGAAGTCCAAAGAGAACCCTGTCGTAGGAGAAGACATCGGTCCACGAATACAGCACATCTATGAGTTGCGTAACAGAGGTCCCAGTACCTTCAGCAAGGCCATACTGGACATCGAGTGGCCCTACAGGTTCAACAACGGCTCTCTGCTCTACATCACTGAACTAGAGGTGGACAGAGGCATGAACTGCAGTACAGACATGGAGATCAACCCACTCAATGTCTCAAATCCTTTGTCAACAGAGACAAATGGTTCAGCTTCCACCAGTGGAGACAATACAGAAGGGAGGAACAGGAACCATGTTCACCGCAGAGAGCTGGcgaagaaagagatggagggagaactgGAAACTCTGGACTGTTCCAAGGCCCAGTGCCTGAAGATCCGGTGTCAGGTGGGCCGTGTGGAGAGAGGTCAGAGTACCACCCTGTACGTCCACTCCAGACTGGGGGTGGCCACCTTCCTCAAGACTGAGAGCCAGAACCGATCGTTCACCGTGAGATCCTCCGCTTCCTTCAGCGTCATAGAGATGCCTTATAACAAGAACCTGGTGTCTGAGCTGCCCTCCAACGCAATTACGGTGAGTATGTCAGTGATCTGGTTGAAATCTGATCCTGAACCTGTTCCCGGGTGGGTGGTGGCGCTGGCTGTGCTGGCTGGACTACTGCTGCTGGCTCTGCTAATCTTCATCATGTATAAGctggGGTTCTTCAAGCGTGTACGCCCCCCTCAGGAGGACAACACGGAGAAGGAACAGCTGGCACCGCAGGAGAACGGTGACAGGAACAATGAAGCCTGAGACCTCCAGCAACCCCCGGAGGTCTCCAGACTTCAATGCAACACCAGGACCTGCATCTACACACTATCTCTCACGAGTAGAACATTTTGCAAATCAAAAAAAATTAAATCACATCTAGCCAGCAGATATTTAGGAGACCTCAtgagctgtcctaaccagttaCCAGTTACCAGTTGGTGTCTTGATAATAGAAAAAGGCAGCTTAGTCAGTGGTTCCTGACCCATAGACAGGTTCCTGAGCCATAGACAGGTTCCTGCACCATAGACAGTCAATTGATTTTGAGTTGAAAGAATGTTTAGCTATTTCTATGATCAACCCATACATAATCTATCGCTATTGACAATGATTTCACAAGAGGCCTAATTCACATGATATGACTCAATAACTATAGCCACTAatgcagggctgcccaaccctcttcctggagaactaGTGTCCTGTaggttcagtccaaccctcttcctggagatctactgtcctgtaggttatcagtccaaccctccaggaagagggttggactgatcaa

Function

symbol description
itgav Acts upstream of or within several processes, including Kupffer's vesicle development; axis elongation involved in somitogenesis; and endothelial cell proliferation. Part of integrin complex. Is expressed in several structures, including axis; diencephalon; head; pleuroperitoneal region; and post-vent vasculature. Human ortholog(s) of this gene implicated in abdominal aortic aneurysm and acute myeloid leukemia. Orthologous to human ITGAV (integrin subunit alpha V).

NR:

description
integrin alpha-V

GO:

id name namespace
GO:0042074 cell migration involved in gastrulation biological_process
GO:0007229 integrin-mediated signaling pathway biological_process
GO:0001525 angiogenesis biological_process
GO:0070121 Kupffer's vesicle development biological_process
GO:0001935 endothelial cell proliferation biological_process
GO:0007155 cell adhesion biological_process
GO:0008305 integrin complex cellular_component
GO:0005515 protein binding molecular_function

KEGG:

id description
K06487 ITGAV, CD51; integrin alpha V

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959466.1 False 4210 mRNA 0.50 30 48139761 48220042
XM_036959467.1 False 3950 mRNA 0.50 31 48139761 48220042
XM_036959468.1 False 3901 mRNA 0.50 30 48139761 48220042
XM_036959469.1 True 3735 mRNA 0.51 30 48139761 48220042

Neighbor

gene id symbol gene type direction distance location
LOC110501953 ihh coding downstream 75308 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 167630 47897057 ~ 47972131 (-)
ptprna LOC106582506 coding downstream 305507 47733219 ~ 47834254 (-)
LOC110501961 LOC106582505 coding downstream 504121 47628880 ~ 47635640 (-)
cfap65 cfap65 coding downstream 586152 47476398 ~ 47553609 (-)
LOC110502188 LOC106582504 coding upstream 285403 48505445 ~ 48645921 (-)
LOC118943644 NA coding upstream 742170 48962212 ~ 48964633 (-)
LOC118943599 NA coding upstream 1250060 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 1902846 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 2240052 50460094 ~ 50465680 (-)
G1817545 NA non-coding downstream 2273 48136407 ~ 48137488 (-)
G1817593 NA non-coding downstream 9512 48129442 ~ 48130249 (-)
G1817543 bin1 non-coding downstream 58964 48040030 ~ 48080797 (-)
G1817549 NA non-coding downstream 63596 48075165 ~ 48076165 (-)
G1817541 NA non-coding downstream 105099 48031393 ~ 48034662 (-)
G1817636 NA non-coding upstream 31969 48252011 ~ 48252265 (-)
G1817663 NA non-coding upstream 33150 48253192 ~ 48287549 (-)
G1817677 NA non-coding upstream 75256 48295298 ~ 48298062 (-)
G1817688 NA non-coding upstream 88828 48308870 ~ 48310462 (-)
G1817701 NA non-coding upstream 106844 48326886 ~ 48328140 (-)
G1817287 LOC106582526 other downstream 666377 47471294 ~ 47473384 (-)
G1816929 NA other downstream 737714 47400985 ~ 47402047 (-)
G1816841 NA other downstream 913115 47225551 ~ 47226646 (-)
G1815615 LOC106582489 other downstream 2298779 45838750 ~ 45840982 (-)
G1817668 NA other upstream 48745 48268787 ~ 48291496 (-)
G1817836 NA other upstream 238984 48459026 ~ 48460040 (-)
G1817968 NA other upstream 249556 48469598 ~ 48470035 (-)
G1818059 NA other upstream 407322 48627364 ~ 48627846 (-)
G1818393 NA other upstream 905472 49125514 ~ 49126117 (-)

Expression


Co-expression Network