LOC118943624


Basic Information

Item Value
gene id LOC118943624
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 51061656 ~ 51063049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038956.1
CAGTCGGGAGTTGACCTGAGATACTGCTGCTGTTGACTTCCTGTGGTGTGTCTGTTGACTTCCTGTGGTGTGTCTGTTGACTTCATGTGGTGTGTCTGTTGACTTCCTGTGGTGTGTCtgttgcgtcccaaatagcaccctattccctatatagtgcactactattgatgAGAGCCCTGATcgaaagtattgcactatatatggaataggattccatttgggTTGCAGGGAGTCTCAGGGCAAAGTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGGTACACTACAGAGCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAGCCATGGTGACTGGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGGTAACCATGGTGACTGGTACACTACAGATCACAGGCTGAGAGTCTCAGGAGTAGG

Function

NR:

description
PREDICTED: protein NLRC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038956.1 True 1340 mRNA 0.50 2 51061656 51063049

Neighbor

gene id symbol gene type direction distance location
LOC118943622 NA coding downstream 4144 51054964 ~ 51057512 (-)
sumo-1 sumo-1 coding downstream 8696 51041718 ~ 51052960 (-)
LOC118943621 NA coding downstream 22038 51037464 ~ 51041332 (-)
als2a NA coding downstream 100921 50872455 ~ 50960735 (-)
LOC110502197 LOC106582575 coding downstream 208462 50803651 ~ 50853194 (-)
fam117bb LOC107593013 coding upstream 46267 51109316 ~ 51189736 (-)
bmpr2b bmpr2 coding upstream 134554 51196922 ~ 51376938 (-)
tspearb tspear coding upstream 332832 51395881 ~ 51450125 (-)
ube2g2 ube2g2 coding upstream 405748 51468797 ~ 51501268 (-)
LOC110501977 LOC106562996 coding upstream 438804 51501853 ~ 51504398 (-)
G1820033 NA non-coding downstream 93791 50967404 ~ 50967865 (-)
G1820019 NA non-coding downstream 139012 50919568 ~ 50922644 (-)
G1820011 NA non-coding downstream 170016 50891279 ~ 50891640 (-)
G1820008 NA non-coding downstream 179412 50881406 ~ 50882244 (-)
G1820075 NA non-coding upstream 3778 51066827 ~ 51070429 (-)
G1820077 NA non-coding upstream 26765 51089814 ~ 51090146 (-)
G1820059 NA non-coding upstream 128760 51191809 ~ 51195296 (-)
G1820122 NA non-coding upstream 153382 51216431 ~ 51217195 (-)
G1820053 LOC106582548 other downstream 35475 51023438 ~ 51026181 (-)
G1820012 NA other downstream 164503 50896572 ~ 50897153 (-)
cd28 LOC100136275 other downstream 564665 50495067 ~ 50496991 (-)
si:ch211-67e16.4 LOC106582542 other downstream 597894 50460094 ~ 50465680 (-)
G1819250 NA other downstream 756618 50301801 ~ 50305038 (-)
carf LOC106582551 other upstream 19940 51059254 ~ 51085922 (-)
G1820212 NA other upstream 363354 51426403 ~ 51427042 (-)
myo10l3 LOC106582557 other upstream 471923 51510785 ~ 51699385 (-)
G1820680 cssa21h3orf70 other upstream 896031 51959080 ~ 51959638 (-)

Expression


Co-expression Network