XLOC_037080 (ska3)


Basic Information

Item Value
gene id XLOC_037080
gene name ska3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 21259657 ~ 21274664 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072982
GGTACCTCAGAGATGATGTGGTGAATGGCAGCATAAGAATAGaaaacaagtggtctaataaaACTTGTGTACTTCAACGATAGTTGGTTCTTTGAACATCTGAATTTATACTCGCTTAAGCAGAAGTGTTATCCATGAATAGGGGGCGGTAACGAGCCTCTTAGTGTTTAGATCGTTTCAGACGTGCAAACGAGTTAGAAAAACTAACCCGGATGGACCGCGAAATTTCAAACAAGAGCTCAGAGTGTTTGCTTAAATGTTTGTGATGAGCCTGTACCATTAAGCATGAATCCGTCAGAGCGATTTTTCTCGAAGCTGCGAAAGCTCACCGTGTATCTGGAGACTGAAAGCAGTAGCCTCTTGCATACAAGCCAGAACCTCAAAGAGGACGAggAGGATGAAGAGACTGGAGCTCAAGCACTGTATCAGCTGCACTCTGAAGTCAGAGCACTAAAGAGGCAAGTTAGGGATCAGGTGGCTACCCATGATACAAGCAGTGCTGACCTGAGGAGCTTCATCAGAAGATGTTTGGTGCTGAAGCAGAGAACCACAGAAGACATTGACAGTCTGAAGAAACACTATGAGAAATATGGTTACAGGCCACGGATATCAAGACTGGGAAGTGCAGAGGTGAATGGTACAAAAGAAGCAGAGGAGCGTGCAAAGAGAGATGCAGAAAAGCCAGATGCAGAAGAGGAAGATGAAGAGACGGAACGTGGAGATTGTGACAAGGTTGATCAGTCAGTGACCCCTGAGAAGATGCCTCCACCTGTTGACCAGCTGCAGACACCAAAGCTGTCAGATTTTGGCCTGTCTGCACTCCAGTTTCAGAGAGTGCTTGGTGAAGCAGAGGTCCCACTGAGTGCTGCTCCTGAGCCTGCCATCGCTCTGTCATCTCCACCAATCCTCATGAACCTGCAGCCTCCGCAGCCAAAGACACCCAAGTGCTCGCTGAGTATGGAGGAGGACGCTCTGACCCCACGACTGGAGGACTTTGGCATCTCTGAGTACACCATGTGCTGGAACAATGATTTCACCATGGATTTGTTCAACAAGAAGCCACCAAAGAACAGCAGcGAAAGAAATGAAAATGTTCTGAAACCCCATAACGTATTCTCCAATACATCATCTGTGCTGAACAAAGACGTTGCTAACAaAAGTCTCGAATCCCCGGAGCCTCCAGAGTTTTGCACCCCAGGATTTAAGATTGCGAAAAACCACGTCCCATCTACTCCACTATTCAATGGAAAGAATGATCTCAATTCTCCTCCTCGCCTCAATAATAACTGTCCTTCCACCCCAGAACTCCCTGCATTTGAAACCCCTTTTGTCAGCAAGCTAATAAAAAAGGAGGACAGAGAGGAAGAAAGCAAGAGGCACTCTGAATCACAGGAGAACAGTTTGCGTCTACCAGATCTTTCAACCACAAATGGGACGTCTTGGAATGATGCTCCTGAGATGCCAAAAATGTTACGTTATGAAGAGGAAGCATTGCCTGAGATGCCGATCCTACAGTCTAATTTTGGAAGTTCTCTAGCTTTTAAAAATACATCTGGTGAAAGTCTCTCAGGGATGAAAACAGGAGCAGGTCATATGTTAGAAATGAAACAGACCTCTGTCCCAGTGCCTGAAGATGGATTCAACCAGGACTGGTGCCTTTCGACTCCGAAAGTCAGAGTGAAGTTCCCAGCAGAGCCCTGCACACCAGAGATGCCTGATATGAGCTCTGTCACTCAGGATATCTTAAAAGTGAGTCACTTAAACCTTGTAATTCTGAAATGGTTATATTTCAGATGTGCTGATAAAtgtcctctctctctttcagctTGTGGCTCAGTGCAAGTATTAAGCACTCACCACTGGATCTGTCCGGCAGACCTCAAAACCTGGCTTTCAAAAAAGTGGCATCAGGAGGAGAACAGCAGTTTGAAGCCGTAACACAAAGGCTCTACTGACTTTTTTATAATTACAAACACTTTTATTACGActtgaaaaaaacttaataaataattttaaaaagcttaAGTACAATTATAACAATCCTTGCTACAAATGCCAGCATTACTAGTGAATGTAGCAAACCTTTGCTCATCTTTTTATTGGGAATATGttcatgtaatttatttgttttggtcttagatttaaatgccatttaaaaatgcTAGGTACACTATATAATAAAGACACtgtagctcacccaaaaattaacatttacccACCACCAGGTGTTTCCAGAGCtctagttttttttctgttgaatacaaggaagatattttgaagaatgtttagaaaccgtaacccttgacttccatagtaagaaaaacaaatactttggaagtcaatggtcaaaGGTTTCCACCTTTCCTCAAattatcttctttggtgttcaacaaaAACTAAGAAACTAAAACATGTTTGTGAAAAGTAAATGAcagtattttcagttttgtgttaactatccctttatgactagttagatcaggggtgtccaaacttagtcctggTGGGCCGGTTTCCGGCTGAGttgagctccaacttgcttcaacacgcCTGCCATGAAGTTTCCAGGTCATCTAGTAAGCActagattagctggttcaggtttgtttgattagggttaaggCTAAACTTTGCAAGACATTGGCGCTCCAGGACTGACTCTGGACACCCCTGAGTTACAGTAGATAAAGCCAGATGGACAAAATGCTTTTGCAGTTTAACCTAACTACAATAAACGAACATACAAATGCCAACAAGGCCAAATGGTTACTTTATAGCTACATGTTATTTTGGAAATTTCCCACATTTTCTGCTACTGAATGTGAGGTACGGTTCAATAGTAGGGTTGGGGTAAAGTTTACTGTGCGAATACTATACTTTTAAATTGTAAGTGTACTTACAATGTACCAACTTGTACATCTTCATATTCTGCACTACATGGAAAAAGTACAAAGTAGTTAGAGACAACTATAAAGTTACTAAAGCTTAATCATTAGTGCATTCATTCTGAGATCTACTTGctaaattgaaatatttatttaaacaatgaaTACTTCATTTAACTAAAAAAAGGTTTATAAATGATACGACTTTAGACaagatactgaaaaaaaaaaacatttattcatgaaTGATTTGAATCACGCTAACAGGACTAGAACTAAAAAGGTAGATCTGATAAAAAACTCCACAAAGAACATAATATATGAAAAGACTTTCCTTTTTACTTCCAAATCGAGATTATCAGCTCAATCATGCTGCTATTCTGCATaaaccttcctgcagagtttagttccgaCATAAACACTCGATCAAATCAAAGTCTTGCAGTTCACCTGAAAAGCTCAGACAAGGgctgaactaaactctgcaggaagacAGACTTCACCCCTTTCATTTAAATGCAGTCAAGTGTTGTTTCAGGTCAGTAGGGCCTCATGCGTCCTTGGAGAGGCGGTGCGCGGTTAGGCGGAGTGATGGCAATGTCAAGATAATCTCCGATCTGAAAGCTTTGTGACTGAAGCGTCATCGAGTCATCTGCACCTTTGCGCCCAGAAACTGTGTTGCCAATTTCTTTAACCCTGCAATAAAGCCAGTGGAGTTATAAAAAATCCATAACAAATCTTAACACAGTATTAAGAACTGTGTATTCATTACCGGTAGATTTGTCGTTTGGGGTCTGGGTAAACAATGGCGAATCCAAAATGTGTGCCTTTCTTCCGAGCTTCCGGATAGACTTCCTTCACCAGGCTTGTCAGTTCTTTTAGAGTAGCATCCATCCTGCAGCCAAGGCATATACAAATCAGGATTGTATGGTTCAGTTGATCATTGATGCAGTGCCTGTTTTATAATAATACTTACCAGGTGTAAATCTGAAGTTCACTAGAGGGCACGTTCCCCCGGGCAAACTCATCCATGCGATGGTGCCTTCCATTGTTGGTGGTGAACACTCTCAGGAGAAGTGGGCATGTCTGCACAACGAGcacaacaaacacatgtagaaaGTATTAATAACAATGTCTTTTAAAACAATCAGACATGCAGATGTGTCTGTGCATCCAATATAATGGTTATTAAACAGTTGGCACAGGATCGTTAGgcaggaatcaaactcgggtcaccgAAGTGCATgtgttgacgcactaaccactgGTGCAGATGTAATCTCATTTCTTAACCAACATCAATTCTGATAATAACTACAAAAGTAGTTTTAACACTAAATTGATTTATGAGAAATATACTTTTCTGTGCAGATTTTTAGAGGTTATTTGTCTTTAAGTCGACGATCAGAACAACATTTGTATTACTTTAGTTCATTTGGCCTGAAATGAAAACATGCTCAATTTTACTCCAAAACAAAACTGAAGAAATGTGCCAAAAATataatgttaaacattttttatataattgcgTTTTTAAATGGAAGCCTGTTAACAAAGAGTATGTGACTTTTTACTTAAATGGCACTGGGATGGTTAAATATTAGTCGACGTTTTTTTACCAGTCCAAAACAGAATCTTGATAAGAAAATgggtaaaatatattaaaagctTAATAAAAGCAACTTTTTATTTGCCAGAATGTACGCTATGCTACATTAACAGATAAAATgagtacaaaataaaacaaaaaggccaAATGTCTAAAAGGAATGCACACGGTTTAAGATACGATTTGTAGTATAACGTTGCAACTAGATATTTTGTAATGTTTCTGTGTACCTACATTTTTAGTTAGCGTTAGATTTACAAATTAGCTTAGCATGCAGGACGCCTCGTTTGTGCACGAATATTCGCGCCACTGACGAACAGAAGTAACTGAAAACAAACCTTTTCTCTATCCACTGGCTTTGTTGGCTCTTTTTTGATCTCCTCCTGTGTGACCCTCGATTCCACAGCCATTTTTATCTTATTTGTTGAAAGAATAAGCGATGAGTCGCTGTTCACGACGCCAGTAAACGCTCGATCGCGGCGCGGTGAGATGATATCATCATAGCCAAGACAGCGAGGACCAATCACGACCGACCGGTTACGACTAGTGAAATGACGACACACTCGTGTCGCCTACTCTCCCCCACCGCCATTTTGGGAGTCAGATTGTAAATATTACTAGTTCAGGAAACCAAATACGTCCACTAATTTGGTGGCATTAATATGGTGCACACTTGCGTAGTGGCCGGTTGTCGGAACAGGAGAACTCCAGGGACCGCGTTATCCTTTTACAGGTTTCCCCGCGACCCGGAGCGGAAGCAGCGCTGGATCGCTGCTGTGAATCGTGAAGGGTGGGTGCCAAACGAGGGCAGCAGACTCTGCAGCACACACTTCATTTCAGGTAGGGTAACATCTTATGTGGTGCATATAGCATGTGTAGGTTAGCAGTAATCTAATCTCTGTGATGGTTGTAAATATGTCTAGTAATGTGTTAAATGGTGATGAAGCCCTGCCTGATGCCTACATTACTCTTACTGTTATAATGCACTTTAGGGCTTGGGTTCAATACAAATGTGGACTAAGCTATTATTTTTGGGGGGGTAAACGCATGGTATTGCTCACTAAATTAACATGTGAAAAATGAATGcgctgtttttcttttatatttctt
>TCONS_00072983
GTGTTTAGATCGTTTCAGACGTGCAAACGAGTTAGAAAAACTAACCCGGATGGACCGCGAAATTTCAAACAAGAGCTCAGAGTGTTTGCTTAAATGTTTGTGATGAGCCTGTACCATTAAGCATGAATCCGTCAGAGCGATTTTTCTCGAAGCTGCGAAAGCTCACCGTGTATCTGGAGACTGAAAGCAGTAGCCTCTTGCATACAAGCCAGAACCTCAAAGAGGACGAggAGGATGAAGAGACTGGAGCTCAAGCACTGTATCAGCTGCACTCTGAAGTCAGAGCACTAAAGAGGCAAGTTAGGGATCAGGTGGCTACCCATGATACAAGCAGTGCTGACCTGAGGAGCTTCATCAGAAGATGTTTGGTGCTGAAGCAGAGAACCACAGAAGACATTGACAGTCTGAAGAAACACTATGAGAAATATGGTTACAGGCCACGGATATCAAGACTGGGAAGTGCAGAGGTGAATGGTACAAAAGAAGCAGAGGAGCGTGCAAAGAGAGATGCAGAAAAGCCAGATGCAGAAGAGGAAGATGAAGAGACGGAACGTGGAGATTGTGACAAGGTTGATCAGTCAGTGACCCCTGAGAAGATGCCTCCACCTGTTGACCAGCTGCAGACACCAAAGCTGTCAGATTTTGGCCTGTCTGCACTCCAGTTTCAGAGAGTGCTTGGTGAAGCAGAGGTCCCACTGAGTGCTGCTCCTGAGCCTGCCATCGCTCTGTCATCTCCACCAATCCTCATGAACCTGCAGCCTCCGCAGCCAAAGACACCCAAGTGCTCGCTGAGTATGGAGGAGGACGCTCTGACCCCACGACTGGAGGACTTTGGCATCTCTGAGTACACCATGTGCTGGAACAATGATTTCACCATGGATTTGTTCAACAAGAAGCCACCAAAGAACAGCAGcGAAAGAAATGAAAATGTTCTGAAACCCCATAACGTATTCTCCAATACATCATCTGTGCTGAACAAAGACGTTGCTAACAaAAGTCTCGAATCCCCGGAGCCTCCAGAGTTTTGCACCCCAGGATTTAAGATTGCGAAAAACCACGTCCCATCTACTCCACTATTCAATGGAAAGAATGATCTCAATTCTCCTCCTCGCCTCAATAATAACTGTCCTTCCACCCCAGAACTCCCTGCATTTGAAACCCCTTTTGTCAGCAAGCTAATAAAAAAGGAGGACAGAGAGGAAGAAAGCAAGAGGCACTCTGAATCACAGGAGAACAGTTTGCGTCTACCAGATCTTTCAACCACAAATGGGACGTCTTGGAATGATGCTCCTGAGATGCCAAAAATGTTACGTTATGAAGAGGAAGCATTGCCTGAGATGCCGATCCTACAGTCTAATTTTGGAAGTTCTCTAGCTTTTAAAAATACATCTGGTGAAAGTCTCTCAGGGATGAAAACAGGAGCAGGTCATATGTTAGAAATGAAACAGACCTCTGTCCCAGTGCCTGAAGATGGATTCAACCAGGACTGGTGCCTTTCGACTCCGAAAGTCAGAGTGAAGTTCCCAGCAGAGCCCTGCACACCAGAGATGCCTGATATGAGCTCTGTCACTCAGGATATCTTAAAActTGTGGCTCAGTGCAAGTATTAAGCACTCACCACTGGATCTGTCCGGCAGACCTCAAAACCTGGCTTTCAAAAAAGTGGCATCAGGAGGAGAACAGCAGTTTGAAGCCGTAACACAAAGGCTCTACTGACTTTTTTATAATTACAAACACTTTTATTACGActtgaaaaaaacttaataaataattttaaaaagcttaAGTACAATTATAACAA
>TCONS_00072984
ACTAACCCGGATGGACCGCGAAATTTCAAACAAGAGCTCAGAGTGTTTGCTTAAATGTTTGTGATGAGCCTGTACCATTAAGCATGAATCCGTCAGAGCGATTTTTCTCGAAGCTGCGAAAGCTCACCGTGTATCTGGAGACTGAAAGCAGTAGCCTCTTGCATACAAGCCAGAACCTCAAAGAGGACGAggAGGATGAAGAGACTGGAGCTCAAGCACTGTATCAGCTGCACTCTGAAGTCAGAGCACTAAAGAGGCAAGTTAGGGATCAGGTGGCTACCCATGATACAAGCAGTGCTGACCTGAGGAGCTTCATCAGAAGATGTTTGGTGCTGAAGCAGAGAACCACAGAAGACATTGACAGTCTGAAGAAACACTATGAGAAATATGGTTACAGGCCACGGATATCAAGACTGGGAAGTGCAGAGGTGAATGGTACAAAAGAAGCAGAGGAGCGTGCAAAGAGAGATGCAGAAAAGCCAGATGCAGAAGAGGAAGATGAAGAGACGGAACGTGGAGATTGTGACAAGTTTCAGAGAGTGCTTGGTGAAGCAGAGGTCCCACTGAGTGCTGCTCCTGAGCCTGCCATCGCTCTGTCATCTCCACCAATCCTCATGAACCTGCAGCCTCCGCAGCCAAAGACACCCAAGTGCTCGCTGAGTATGGAGGAGGACGCTCTGACCCCACGACTGGAGGACTTTGGCATCTCTGAGTACACCATGTGCTGGAACAATGATTTCACCATGGATTTGTTCAACAAGAAGCCACCAAAGAACAGCAGcGAAAGAAATGAAAATGTTCTGAAACCCCATAACGTATTCTCCAATACATCATCTGTGCTGAACAAAGACGTTGCTAACAaAAGTCTCGAATCCCCGGAGCCTCCAGAGTTTTGCACCCCAGGATTTAAGATTGCGAAAAACCACGTCCCATCTACTCCACTATTCAATGGAAAGAATGATCT
>TCONS_00072985
taactGCTATTTCAGCCTGTACCATTAAGCATGAATCCGTCAGAGCGATTTTTCTCGAAGCTGCGAAAGCTCACCGTGTATCTGGAGACTGAAAGCAGTAGCCTCTTGCATACAAGCCAGAACCTCAAAGAGGACGAggAGGATGAAGAGACTGGAGCTCAAGCACTGTATCAGCTGCACTCTGAAGTCAGAGCACTAAAGAGGCAAGTTAGGGATCAGGTGGCTACCCATGATACAAGCAGTGCTGACCTGAGGAGCTTCATCAGAAGATGTTTGGTGCTGAAGCAGAGAACCACAGAAGACATTGACAGTCTGAAGAAACACTATGAGAAATATGGTTACAGGCCACGGATATCAAGACTGGGAAGTGCAGAGGTGAATGGTACAAAAGAAGCAGAGGAGCGTGCAAAGAGAGATGCAGAAAAGCCAGATGCAGAAGAGGAAGATGAAGAGACGGAACGTGGAGATTGTGACAAGGTTGATCAGTCAGTGACCCCTGAGAAGATGCCTCCACCTGTTGACCAGCTGCAGACACCAAAGCTGTCAGATTTTGGCCTGTCTGCACTCCAGTTTCAGAGAGTGCTTGGTGAAGCAGAGGTCCCACTGAGTGCTGCTCCTGAGCCTGCCATCGCTCTGTCATCTCCACCAATCCTCATGAACCTGCAGCCTCCGCAGCCAAAGACACCCAAGTGCTCGCTGAGTATGGAGGAGGACGCTCTGACCCCACGACTGGAGGACTTTGGCATCTCTGAGTACACCATGTGCTGGAACAATGATTTCACCATGGATTTGTTCAACAAGAAGCCACCAAAGAACAGCAGcGAAAGAAATGAAAATGTTCTGAAACCCCATAACG
>TCONS_00072986
ATGGTGCACACTTGCGTAGTGGCCGGTTGTCGGAACAGGAGAACTCCAGGGACCGCGTTATCCTTTTACAGGTTTCCCCGCGACCCGGAGCGGAAGCAGCGCTGGATCGCTGCTGTGAATCGTGAAGGGTGGGTGCCAAACGAGGGCAGCAGACTCTGCAGCACACACTTCATTTCAGgAAAACAAGTGAAAAATCCTCGATCCCCTGATTTTGTTCCTTCAGTTTTCACCTCAGCGCCACTTTCCCCAAATATGAAAGAAGCAGGTTCTTGTGAAATGTATGATAAACAAGAGGCACAAGTGGAGGCCGCCAATGCTTTGCTCTTTTTGCAAGGACAAGGGCGTTTCTTGGAGGAAAATAGCCAGATGACAAGTCAAGAAGAGCCGGAGAGTGTTTCCTCTTCACTGAGCAGTTGTGACGAGGAGGATGTTAAGACTGAAGATGCTGTAAAAGAAGAAATCTCACAAACAAGCGTACTCCAAAGAGGACAACCAGTCAAAAACATTCCCCCTGACTATGAGTCCAGTCTCGAGGCTCTTAAGAAAGAAAACATGGAGCTGAGGGAATCGCTAGATAAGATGTCTCTCACTGAGGCTTCCTTTAGGAATGATCCAGAGAAGGTTCGCTTTTACACAGGATTGCCGAACTACTTTGTGTTCGAGACGGTCATGTTGCTTCTCATTCCACATATGAAAGGAGACAAAAATGTCAAACTCTCCAAATTCCAGCAACTTCTCTTGACACTAATGCGCCTCAAGCTGGATCTCAGAAACCAAGACTTGGCTTATCGTTTTGGAGTCAAGGTTGCCACAGTGGCCAGGACTGTCCATCGGATTATTCACATAATGTTCACCACTCTTGTGCCAACTGCTGTTTTTTGGCCCTCCAGAGTAGAGCTCAGAAAAAATCTACCAGCTGCATTGTGTTGCACATACCCAGACTGTGCGGTGATCATTGACTGCTTTAGGGTGTCTCTGGAAAGAGCTCTCAGTGTGGATGGAAATCAAGATGTTGCATCTACAGCATTGACCACACCAGTGCAGTCCACTGTGAATGAGCTTAAATATGTCATCGGTGTTGCTCCTCAGGGTGTAGTCACGTTTGTTTCCAGAGGATCTCCGGGTCATGTCAGCGACAAGAGTCTAGTTGAGAGTTCTGGCCTTCTCTGTAAACTCCTGCCTGGTGATGTTGTTCTGGCAGAGCGTGACTTTGACATTGGGGGCTTAGTAGGTGCTCGGAAAGCCGAACTCAAAATCACTAGTAGCACTTACTTTGAAAATAGCCAGAGCGGACTGGATGGAGATTTCTCGCCAGTTGGAGCACTATCAGATAAAGCGATTGCTCATATGCATGTTGGAAAGGTAATAGACATTGTTAAGAGGAGATATTCCATGTTAACTGGACCAGTGGAGAGCCCCTTTACAGTCGTAGACCGCACTTCCAATGTGAGCACTTTTGATAAGATTGTGCAGGTTGCTTGTGCCTTGAATAATCTGTGCATTTCTGCTGCTCCCCTGGAATGATATTTGCCACACTTTTGTAAAAGTCACTTTTACTTGTACCATTGCTGAATGCACCTTTATTGTTTCTCTATTATTATAGAAGACATTTTCTGTTCTTACAAGAGGGATCAGAACAAGGACTGGTTTACATCTGGTGTTAAGATGCATTTTGGTCAATCTGATTAGAAGTAGACGAGGGAGACACATTCACCGTTATACCTGCTGCTTAATCCAGCTGTTTTGTTCACTTTGAACCactttcttgatttttttagaGGATTTCAGTGTAATACTTTGCAATAAGCTCGCACATCTAAATGAAATATAATAGCAGACAGTGGAAAATGAGAGCAAAGAACAGCAGCTTTTGTTTCTGCTACAAAACTGCAGAAAGCTGTTGGGTTTGTGTTAGAGTCACGACTGGTAGGAGAACTACTGGTAGTTGTAGATCAAAGCTTAAAATCTTATCCTCAAATTCATGCATTTACAGCCAAAAGTGaatctgtgtttaaaaaaaacttacagtGGCTgagagacaaaaataaaaaaaactgcaaatagaAATGCTAACAAATTGAGAAAAACATTGTTATGCACTtcaattcacacacatgcacgcaaatATTTTAACGCATCTAAATACTGAAATGCACTACAAGTTAAGAAAACCTTTCATAAGGAAAAACACTAACATATTAAgaaaacaaagggactaagctgaaaagaaaattaatgaatattagaAAAACATCTTCGCTTTGACTACACACATGTGCACGTAAATTCTCACAAGGCATACAAATACAGAAACGCACTGCAAACAGCACAGACTACAACAGAAATTTGTCGGGGGGAACAAACAAGAAATCATACAATTAGGacattaacataaacaaaacaaactcagaattctgacaatTTTGCATCCTAAAGTAGGATTGTCACGATGCTGGAATTTGAAAAACGTTCATTTTCCTcgaacatttgagcactgttgagcacgTTCTGATTTGCCACTGTGTtcaagtgctcaacagaaatgactgtaattggccgtgaaggtcattgGTTCACCGAACTCATCGCAGTTTACTGACATACATTTTTTCCACGTACATTTGAGAGCTGTTAAGCACAATCTTTAACAGCGCTGATttgtcattgtgttcacatgctcaacagaaatgactgtgattggccatgaaggtcatagGTTTACCAAACTCATCGCTGTTTACTgcgtgtaaccacagatacagagacactggagcatttcatAGTCGCGCCTATCAGCTGGTtggtctataagctgacatacaagtGATCCGTTGATGAATCGCTGCTTTAAagcgctccagtgtccctgtatctgtggttacacgcagtaaacagtggtgagttcggtAAACCAATGGCCTTCAAGGCCAataacagtcatttctgttgagcatgtgaacacaatggcaaatcagcgctgtttaagaaagtggtcaacagcgctcaaatgtttgaGTAAAATGAAAAATTCCAGTTTTTTAAAATTCCAGTACAGACTGGTATTGAATTttggtatcgtgacaaccctactcTAAATAAGAAGCAGCGGGGCTTGTGACTTTTGTGTTGTCAAACGGATGAAGATGTTTTCTCAGTTTGTTATTGATTTATATATGCTCAAGCGCACTTAAACCATTATAGAAACTAGAAGTGGTGTGCAGAATGAAAGAATTTAGGGCTTTTTTTCACAGAAACTGAACAAAATTGCTCAGGAAAAGGAACAAatcaaaacatttacatttacacagcGTATTTTGCTTCATGCAAATGATTAAATACATTCCCTTCATTTGTTCTTAAAGTTATTCCAAAagtctaatatttttcttcaacacCTTCAAACCAAACTTACTAGCTGAAATCATGCCTGGTTAGTGTACTTTAACAACACTAACTATAATGGTAGGTTGAGGATGAGGTGTTTTTatctgatttttatttgcatttgtccACATGAGCGTCTACATTTATGTGTTTGGACTACCTCTGGATGTGGTTGATAGTTTACAAAGTGTTTCAGCCTCCATTCACACATGCATTTATCATCGTCCATTTGTGATCAGATTGACAGAAACGCATCTTAATATCAGCTGTTAACAGGGCCTTATGCAACTTAAGGACCAGTTCCAATCATTAGTTAGGCACAGTTCACTGGACAATcttccctctgtgtgtgtgtgattttgtttTACGTAAGGAGCTTCCTTAGTCTCTGAGCTGACTTTGTTGATGCTTTGGTTTGATAGAGACATTCCATCCATAGCTTAACTTTAAATTGGTATTGTCGAGAGTGGAAGTTGTATGCTGAGAATTTCAACTATTCAAGGCCCTGAAGAATCGCCTCGGTCAGAGACTCTTATAGTCATTTACTTTGACAGCAGCTGCCTTTAGGTTCCAGTGCCTTTGTCTGAGTTATGCCTCCTATGGTTTTCTTTCGCTTCTGTatagatatataatatatttttgtcaatAACCCAGCAGTACTGTGCTTTTTACTTCTGATGATGCCTAGTCACTATTACTATGGGATTAAGTACCATAGAATTACCATTTAGTTATTTGCATTGTGTGTGATCATTGTTTTAATCAACATTAATAGCATTTAGCATGATGTATTCACTCTGAAGTTCAACCATTGCACTTGTTTATCCTTCCTGGCTGTCACtcaaatgtgtttgtgtgctccATTTATCTGCGTTTGAGAAGATGATGCTTCTGTTTTCCCATTTTTGTCATGTGTCTGATGTGCAGAGACGACCAACACAACTGTAAGTCAATGTAGCATCCTGTTGTATAACATGTAAGAAAATGTTCCCATAAACTTTGTAATAACGGTTATGCTTCAGCTTCTTTATTGtttgagtatttattttaatcagcAGAAATAATCAGAAGCTAAATTTACATTtctattaaggtaaagttggttttatattcacacattcattcagtgacaacttgtgacttgctccctatattgtttaccatgttactttgaacatttgctctgaaatcacatgtactgtaagtatgacttcaaaacaacattagcactatttatttgactgtgaacagtgttgtactttgatggCCTTTggatgctaatatgatttccctatttagaattagcaaagaatacttttctaaaCTTAtactattaaggagaaagtcagaatgtgtgaataaaaaaccaactttacatcaaaatatatttattttggtgACTCACATTTATACTTGAAAAAATGAATTTGCCACACTGCAGGACTAAAaggtttacactttattttgatggtacctattgcattttgttgactaaaagttgcaacTACTTCTCATTAGGTTTGTCGTGATACAATTAATTAATGTCACGATAATATACCAGCTGAAGCATTGTGATaccaatactgtaattcataactcaaatccatgtaataaagaaaaatggcagaaatactatatttgttATAATAGGTCAACATTAATTGATATATTTttcccttattattgaaaaaagtatttgtaCGTCTCTTCacctaaaatatatttgtaccagcaaaagaaatacattaaaataaagtaacaaattataccaaacaaaatttgttacaaaagagcATTTTTGCAACAAACT

Function

symbol description
ska3 Predicted to be involved in chromosome segregation; mitotic cell cycle; and regulation of microtubule polymerization or depolymerization. Predicted to act upstream of or within cell division. Predicted to be located in kinetochore. Predicted to be part of outer kinetochore. Predicted to be active in spindle microtubule. Orthologous to human SKA3 (spindle and kinetochore associated complex subunit 3).

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0007059 chromosome segregation biological_process
GO:0031110 regulation of microtubule polymerization or depolymerization biological_process
GO:0051301 cell division biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0000775 chromosome, centromeric region cellular_component
GO:0000776 kinetochore cellular_component
GO:0000940 condensed chromosome outer kinetochore cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005874 microtubule cellular_component
GO:0005876 spindle microtubule cellular_component
GO:0005694 chromosome cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2997 Predicted to be involved in chromosome segregation; mitotic cell cycle; and regulation of microtubule polymerization or depolymerization. Predicted to act upstream of or within cell division. Predicted to be located in kinetochore. Predicted to be part of outer kinetochore. Predicted to be active in spindle microtubule. Orthologous to human SKA3 (spindle and kinetochore associated complex subunit 3).

Ensembl:

ensembl_id ENSDARG00000069917 ENSDARG00000112751

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072982 False 5604 mRNA 0.41 9 21259657 21269186
TCONS_00072983 False 1801 mRNA 0.46 10 21259820 21265622
TCONS_00072984 False 964 mRNA 0.48 8 21259859 21264580
TCONS_00072985 False 856 mRNA 0.49 5 21260314 21264242
TCONS_00072986 True 5194 mRNA 0.39 2 21268739 21274664

Neighbor

gene id symbol gene type direction distance location
XLOC_037079 hcn5 coding upstream 2141 21243335 ~ 21257516 (+)
XLOC_037078 pla1a coding upstream 33525 21214940 ~ 21226132 (+)
XLOC_037077 NA coding upstream 54185 21202272 ~ 21205472 (+)
XLOC_037076 hsd3b1 coding upstream 59193 21194445 ~ 21200464 (+)
XLOC_037075 si:rp71-68n21.9 coding upstream 82796 21165017 ~ 21176861 (+)
XLOC_037081 lats2 coding downstream 3182 21277846 ~ 21299336 (+)
XLOC_037082 xpo4 coding downstream 32238 21306902 ~ 21357841 (+)
XLOC_037083 eef1akmt1 coding downstream 84277 21358941 ~ 21363501 (+)
XLOC_037084 cryl1 coding downstream 108956 21383620 ~ 21405066 (+)
XLOC_037085 gja3 coding downstream 133323 21407987 ~ 21409466 (+)
XLOC_037067 CR456628.1 non-coding upstream 823142 20433812 ~ 20436515 (+)
XLOC_037066 CR456628.2 non-coding upstream 867623 20386745 ~ 20392034 (+)
XLOC_037065 CR933734.2 non-coding upstream 1418602 19837383 ~ 19841055 (+)
XLOC_037086 BX649266.2 non-coding downstream 221209 21495873 ~ 21496699 (+)
XLOC_037089 NA non-coding downstream 487032 21761696 ~ 21765735 (+)
XLOC_037095 CR536604.1 non-coding downstream 709445 21984109 ~ 21985996 (+)
XLOC_037104 NA non-coding downstream 1038069 22312733 ~ 22313617 (+)
XLOC_037108 BX548053.3 non-coding downstream 1302281 22576945 ~ 22577059 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_09851362_09853119 NA coding CI01000009 null 9849992 ~ 9853119 (-)