XLOC_037125 (tmem163a)


Basic Information

Item Value
gene id XLOC_037125
gene name tmem163a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 23255410 ~ 23313342 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073079
TGGGGGTCCGTTGCTGATGCTGGGCAGATTGCGTTTATCTCCGCATCTCTGCTCCGCTACCCTTAATGCTGCCACTGGATGGCTGCGCGACGCAGATCGACGTGAGATTATTTATTGAAGActtcatttgatttaaaaagcaagaaaacaaataaagctaACAATGACAGACAGTACGACTTCAGATCTGTGTCCTGTTCCCAATCCGACTATTGTGGACCCTTCGGCTGTGCGAAACGGACAATGCGCTGCTGCCCAGGATCCAAACCTACCCAAACGAGGGAGCCAGGGCGACCCTTTTAATGTGGACCAGGATCAGGAGATGAAAATCACAGATAGCGTTGAGGGCCAAGGTGTCTGTTGGAAAGCAGCATGCGCCTGAAGCCTCATGAGGCTCAGAGTTACAGGAAGAAAGCCCTGTGGGTGTCCTGGATCTCCATTGTGGTGACGCTCATCCTGGCAGTGGCAGGTTTCACTGTATCCTTCATGAGACACAGTGCTTCAGCATTTGGATTTGCTTTTGATGCGACGTTAGATGTGCTTTCCTCCATTATAGTGCTGTGGCGCTACAGCAACGCTGCAGCAGTGCACTCGGCCCATAGAGAATACATAGCATGTGTGATACTGGGAGTGATCTTCATCTTATCATCTCTGTGTATTTTGGGGAAAGCCATCCATGATCTGGCCACCAAACTTCTACCTGAAGTGGATGACTTTCTGTTCAGCGTTTCTATCGTCAGTGGCCTCATGTGTGTCATTCTTGCTGTTGCCAAGTTCATGCTGGGAAGGATTTTGACCAGCAGAGCCCTAATCACTGACGgCTTTAACTCTATGGTTGGAGGCATCATGGGCTTTTCCATCCTCATCAGTGCCGAGGTGTTCAGACATTATCCCAACGTCTGGTACCTGGACGGAACCATCGGGATCCTGATTGGACTCGTCATTCAAGCTTATGGAGTCAAGCTATTGGTTGACATGATACCACGAGTAAGACAAACTCGAAACTATGAGCGCTTTGAGTAACGCTGGCTCAGAGGAAAAGAAAGGCATTGTGTGGATCCATCTTTCCCTTTTCACTCCTGCTGCTCTCTCAACACACACGATACCCAAACAAATCCAGGAATAACGTGCTGGCAGCCAAATCAGCATCATATACATCCAGACCAGCTTCTCACGTCCTCCTTCTCTCAGCACAACTCTGAAGAGAGAATGGAGGAAAAAAACAAGCAGTTCAA
>TCONS_00073078
TGGGGGTCCGTTGCTGATGCTGGGCAGATTGCGTTTATCTCCGCATCTCTGCTCCGCTACCCTTAATGCTGCCACTGGATGGCTGCGCGACGCAGATCGACGTGAGATTATTTATTGAAGActtcatttgatttaaaaagcaagaaaacaaataaagctaACAATGACAGACAGTACGACTTCAGATCTGTGTCCTGTTCCCAATCCGACTATTGTGGACCCTTCGGCTGTGCGAAACGGACAATGCGCTGCTGCCCAGGATCCAAACCTACCCAAACGAGGGAGCCAGGGCGACCCTTTTAATGTGGACCAGGATCAGGAGATGAAAATCACAGATAGCGTTGAGGGCCAAGGTCTGTTGGAAAGCAGCATGCGCCTGAAGCCTCATGAGGCTCAGAGTTACAGGAAGAAAGCCCTGTGGGTGTCCTGGATCTCCATTGTGGTGACGCTCATCCTGGCAGTGGCAGGTTTCACTGTATCCTTCATGAGACACAGTGCTTCAGCATTTGGATTTGCTTTTGATGCGACGTTAGATGTGCTTTCCTCCATTATAGTGCTGTGGCGCTACAGCAACGCTGCAGCAGTGCACTCGGCCCATAGAGAATACATAGCATGTGTGATACTGGGAGTGATCTTCATCTTATCATCTCTGTGTATTTTGGGGAAAGCCATCCATGATCTGGCCACCAAACTTCTACCTGAAGTGGATGACTTTCTGTTCAGCGTTTCTATCGTCAGTGGCCTCATGTGTGTCATTCTTGCTGTTGCCAAGTTCATGCTGGGAAGGATTTTGACCAGCAGAGCCCTAATCACTGACGgCTTTAACTCTATGGTTGGAGGCATCATGGGCTTTTCCATCCTCATCAGTGCCGAGGTGTTCAGACATTATCCCAACGTCTGGTACCTGGACGGAACCATCGGGATCCTGATTGGACTCGTCATTCAAGCTTATGGAGTCAAGCTATTGGTTGACATGATACCACGAGTAAGACAAACTCGAAACTATGAGCGCTTTGAGTAACGCTGGCTCAGAGGAAAAGAAAGGCATTGTGTGGATCCATCTTTCCCTTTTCACTCCTGCTGCTCTCTCAACACACACGATACCCAAACAAATCCAGGAATAACGTGCTGGCAGCCAAATCAGCATCATATACATCCAGACCAGCTTCTCACGTCCTCCTTCTCTCAGCACAACTCTGAAGAGAGAATGGAGGAAAAAAACAAGCAGTTCAA

Function

symbol description
tmem163a Predicted to enable zinc ion binding activity. Predicted to be located in early endosome membrane and synapse. Predicted to be integral component of membrane. Predicted to be active in membrane. Predicted to be integral component of synaptic vesicle membrane. Orthologous to human TMEM163 (transmembrane protein 163).

GO:

id name namespace
GO:0099180 zinc ion import into synaptic vesicle biological_process
GO:0030285 integral component of synaptic vesicle membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-429 Predicted to enable zinc ion binding activity. Predicted to be located in early endosome membrane and synapse. Predicted to be integral component of membrane. Predicted to be active in membrane. Predicted to be integral component of synaptic vesicle membrane. Orthologous to human TMEM163 (transmembrane protein 163).

Ensembl:

ensembl_id ENSDARG00000079858

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073079 False 1235 mRNA 0.49 8 23255410 23313342
TCONS_00073078 True 1233 mRNA 0.48 8 23255410 23313342

Neighbor

gene id symbol gene type direction distance location
XLOC_037124 map3k19 coding upstream 21346 23232901 ~ 23234064 (+)
XLOC_037123 map3k19 coding upstream 24207 23224761 ~ 23231203 (+)
XLOC_037121 BX936418.1 coding upstream 93026 23124252 ~ 23162384 (+)
XLOC_037122 NA coding upstream 127179 23126156 ~ 23128231 (+)
XLOC_037120 mmadhc coding upstream 199170 23049500 ~ 23056240 (+)
XLOC_037126 NA coding downstream 8492 23321834 ~ 23333979 (+)
XLOC_037127 NA coding downstream 50506 23363848 ~ 23456345 (+)
XLOC_037128 CR392363.1 coding downstream 50900 23364242 ~ 23367209 (+)
XLOC_037129 cntnap5a coding downstream 198571 23511913 ~ 23625232 (+)
XLOC_037130 gypc coding downstream 352435 23665777 ~ 23718614 (+)
XLOC_037119 CR394542.1 non-coding upstream 209025 23046267 ~ 23046385 (+)
XLOC_037116 NA non-coding upstream 257350 22988941 ~ 22998060 (+)
XLOC_037110 NA non-coding upstream 612725 22642386 ~ 22642685 (+)
XLOC_037108 BX548053.3 non-coding upstream 678351 22576945 ~ 22577059 (+)
XLOC_037131 BX957274.1 non-coding downstream 383582 23696924 ~ 23700456 (+)
XLOC_037136 NA non-coding downstream 571014 23884356 ~ 23887281 (+)

Expression


Co-expression Network