G1799693


Basic Information

Item Value
gene id G1799693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31642743 ~ 31643059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2059477
acaaatttgtgcaatacttgacagaaataatatttttgtgcatatggaacatttctggaatcttttatttcagctaatcaaacatggaaccaacactttacatgttgtgtttatatttttgtcagtggtgtaaagtacctaagtaaaaatactaagtcgtttttgggggtacagttgaagtcagaagtttacatacacctttacaactcagtttttcacaattcctgacatttaatcctagtaaaaattccctctcctaggtcaggtaggatcaccactttattttaagactgtgaaatgtcagaataatagtagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2059477 True 317 lncRNA 0.32 1 31642743 31643059

Neighbor

gene id symbol gene type direction distance location
neurod1 LOC106582267 coding upstream 4145 31635510 ~ 31638598 (+)
pde1a LOC106582264 coding upstream 107222 31458011 ~ 31535521 (+)
LOC110501756 LOC106586411 coding upstream 275932 31364542 ~ 31366811 (+)
dnajc10 LOC106582260 coding upstream 375614 31249607 ~ 31267129 (+)
LOC110502091 LOC106582258 coding upstream 405380 31206388 ~ 31237363 (+)
cerkl cerkl coding downstream 1361 31644420 ~ 31738039 (+)
cwc22 LOC106582271 coding downstream 451115 32094174 ~ 32144432 (+)
znf385b znf385b coding downstream 512236 32155295 ~ 32312355 (+)
LOC110501767 LOC106582273 coding downstream 674064 32317123 ~ 32374208 (+)
LOC110501768 LOC106582274 coding downstream 742353 32385412 ~ 32420120 (+)
G1799630 NA non-coding upstream 58779 31583022 ~ 31583964 (+)
G1799624 NA non-coding upstream 70289 31572249 ~ 31572454 (+)
G1799506 NA non-coding upstream 90268 31503418 ~ 31552475 (+)
G1798661 NA non-coding upstream 226776 31378219 ~ 31415967 (+)
G1798615 NA non-coding upstream 327715 31313092 ~ 31315028 (+)
G1799723 NA non-coding downstream 57294 31700353 ~ 31700765 (+)
G1799699 itga4 non-coding downstream 102046 31745105 ~ 31746376 (+)
G1799858 NA non-coding downstream 291520 31934579 ~ 31936678 (+)
G1799859 NA non-coding downstream 294092 31937151 ~ 31938169 (+)
G1798597 NA other upstream 345324 31293552 ~ 31297419 (+)
G1798579 NA other upstream 350538 31246481 ~ 31292205 (+)
G1798397 NA other upstream 751676 30888661 ~ 30891067 (+)
G1798168 NA other upstream 1096789 30500656 ~ 30545954 (+)
LOC118943632 LOC100194703 other upstream 1717361 29917773 ~ 29933035 (+)
G1800754 NA other downstream 1267734 32910793 ~ 32914182 (+)
LOC110501795 LOC106596205 other downstream 4097380 35740427 ~ 35760519 (+)
G1804873 NA other downstream 4231503 35874562 ~ 35875452 (+)
G1805191 NA other downstream 4720537 36363596 ~ 36363930 (+)

Expression


Co-expression Network