Gene
RNA
| Item | Value |
|---|---|
| gene id | G1799871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31951261 ~ 31956606 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2059661 | True | 301 | lncRNA | 0.37 | 2 | 31951261 | 31956606 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cerkl | cerkl | coding | upstream | 214297 | 31644420 ~ 31738039 (+) |
| neurod1 | LOC106582267 | coding | upstream | 312663 | 31635510 ~ 31638598 (+) |
| pde1a | LOC106582264 | coding | upstream | 415740 | 31458011 ~ 31535521 (+) |
| LOC110501756 | LOC106586411 | coding | upstream | 584450 | 31364542 ~ 31366811 (+) |
| dnajc10 | LOC106582260 | coding | upstream | 684132 | 31249607 ~ 31267129 (+) |
| cwc22 | LOC106582271 | coding | downstream | 137568 | 32094174 ~ 32144432 (+) |
| znf385b | znf385b | coding | downstream | 198689 | 32155295 ~ 32312355 (+) |
| LOC110501767 | LOC106582273 | coding | downstream | 360517 | 32317123 ~ 32374208 (+) |
| LOC110501768 | LOC106582274 | coding | downstream | 428806 | 32385412 ~ 32420120 (+) |
| LOC110501775 | LOC106582275 | coding | downstream | 474492 | 32431098 ~ 32607822 (+) |
| G1799859 | NA | non-coding | upstream | 13092 | 31937151 ~ 31938169 (+) |
| G1799858 | NA | non-coding | upstream | 14583 | 31934579 ~ 31936678 (+) |
| G1799699 | itga4 | non-coding | upstream | 204885 | 31745105 ~ 31746376 (+) |
| G1799723 | NA | non-coding | upstream | 250496 | 31700353 ~ 31700765 (+) |
| G1799909 | NA | non-coding | downstream | 51898 | 32008504 ~ 32008796 (+) |
| G1799951 | NA | non-coding | downstream | 130549 | 32087155 ~ 32088558 (+) |
| G1800724 | NA | non-coding | downstream | 854474 | 32811080 ~ 32811350 (+) |
| LOC110502125 | LOC106582208 | non-coding | downstream | 859498 | 32811982 ~ 32816908 (+) |
| G1800759 | NA | non-coding | downstream | 946320 | 32902926 ~ 32903150 (+) |
| G1798597 | NA | other | upstream | 653842 | 31293552 ~ 31297419 (+) |
| G1798579 | NA | other | upstream | 659056 | 31246481 ~ 31292205 (+) |
| G1798397 | NA | other | upstream | 1060194 | 30888661 ~ 30891067 (+) |
| G1798168 | NA | other | upstream | 1405307 | 30500656 ~ 30545954 (+) |
| LOC118943632 | LOC100194703 | other | upstream | 2025879 | 29917773 ~ 29933035 (+) |
| G1800754 | NA | other | downstream | 954187 | 32910793 ~ 32914182 (+) |
| LOC110501795 | LOC106596205 | other | downstream | 3783833 | 35740427 ~ 35760519 (+) |
| G1804873 | NA | other | downstream | 3917956 | 35874562 ~ 35875452 (+) |
| G1805191 | NA | other | downstream | 4406990 | 36363596 ~ 36363930 (+) |
