G1805927 (LOC106582360)


Basic Information

Item Value
gene id G1805927
gene name LOC106582360
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36057844 ~ 36059768 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2066167
TGGATACTGTATTTGAAATGTACAAAAGCtatatacaacacacacacacacacactcacactgagcaTAGCCAAATGAATGAGCAGTATACCTATACATACTATAAGGCTACTTTAAGTCCAGGAAACAAACTAAATAAAAACTTAGGAGTTGCGGTATCTCATTGTCTTTGATATGATTCGTAATCAAAGTAATACATTCCTTATTTGAATCTCCATATAGTCCATGTCTAGCTCAGAActcagggaagagggaggggtaaTGAATCCACTAATTAGTGTGTGATCATGTCCACAGAGAACACATGGAGTACTTGCATATTCCTTTAGAGATCGGATTCCTCCAAGACGTTGCGAGGCATGGGGCTCCGTGTGTATCTTcacagactgactgacactgaggCAGATCTCTGTCCTTTTCAATCATACAGTCAGACTGACAAGGAGGAGGGTCCATAGAGGGTTCGACATTTTTTAGAGGGCACTTGGAGGATATTTTATACAGTATGACTGAAAGGGGCCATCTCCTGTTGTACGCCAGGGTCTGGTTTCCCAgatacagattaagcctagtcctggactaaaaatcaTTTTCAATGGATAATCTCCACTAAGCATGGGTTGTAGTCCAGCACTAGGCTTAATCTTTGTCCGGGAAACCGGCCCTAAGAGCTTGGCAAGGGAACCTGTTCCACTGCAAGTTCCTCTATACACGGATAGATGAAAACAATGTAGCATCGCAATGTTAAATAGTGGCATCATACTGTAATCGGCTTGCAATAATTACGTCCCTTCAACATAATTTAAACCACGTACCTTACAGTATATTTATAAACATGATGGAAGGTTGTAATGAGAAATGATATTCTAATATTTTCATACGCATTTTTTCTTGGCAACATTGTTACATGTATGTACGTTTTATGAGTTCACATATTACTCAAACTTGATCTTTTTATCAAGGCACTTGGTGAACTGCTTTCAGTGCACTGCTTTTTAAAAGGTAACAAACATCAACAAATACTGAGCAATGGACACATTTGCCAATGTATTTTTATACCCTTGTCTATTTTTATTCGTAGATACAAAGTATGGCTTTTTAAAACAGTGATACAAATACCCCTTATGTCTTTACTACACTTACTTTATCAACATAAACACTACTTAAAATGTACTTGAGCAAATATTACATATAACTGGATGAGCAAAGTCTCTTTACAGGCCGGTAGAGATCGACATTCTCCTGATAAGTAACTATTTCCATAAGGTGTTGTTACATATAATCAGAGCTTTTATAGTACAATTTTCCTGATGCTTTCTTGAAATGGTCTGAATATACAAGAGGGGCAtcccaataatctctccttcctcctgaagtgtgcactacTCCCCACAAATGTAAAAGCATTGGATAGGTGTAGGCATGGGCCAGGGGGAGTTTCCATTCACCAATCATTTCCTTTGAAATTCATGAAAGGAAGTGAACACGTGAACACTTTGGGAGAAAAACTATTGCGATGCAGCCAAGGCATTAGCTCATCATGTTGAGGAACTTACTCTCCTCAGCCAGGGCGGTCAACATGGAGTTCATATCGCCGATGGCCATGTTACCGATCCCTGCTGGCACAGAGGCCAGGGTCACAGAGCTACGGGGGGTGGTGAGCCTGGAGGAGTTCTGGGACAGACTTGTGAGGAGCCCGGGGCTGAGGGTCCCCGACATCAGGCTGGAGTGGTCACCATCATCCAACATGGCATCAAAGTCAATCTGGGCGTGCTCCACACCAGAGGAGTCCACGGTGCTGGTGACCTGGTTGACCCCTGGGGATACCATGGTAACGGCAGTGCCTACCAGTGCCTGGGGTGTGCAGGGGGACATGGGGGAGTCGAAACTCAGGTTGTTGTTGGACTCGAACATGTGTATCTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2066167 True 1925 TUCP 0.43 1 36057844 36059768

Neighbor

gene id symbol gene type direction distance location
LOC110501794 ralb coding downstream 319040 35697586 ~ 35738804 (-)
LOC110502094 LOC106582301 coding downstream 586639 35138330 ~ 35471205 (-)
LOC110501791 LOC106582296 coding downstream 1465156 34585700 ~ 34592688 (-)
bard1 bard1 coding downstream 1513612 34473620 ~ 34544232 (-)
LOC110502093 LOC106582292 coding downstream 2074342 33951053 ~ 33983502 (-)
tfcp2l1 tf2l1 coding upstream 33420 36093188 ~ 36102895 (-)
LOC110502096 LOC106582358 coding upstream 46279 36106047 ~ 36228129 (-)
nifk mk67i coding upstream 168593 36228361 ~ 36232090 (-)
LOC118943734 NA coding upstream 169538 36229306 ~ 36229431 (-)
LOC118943733 NA coding upstream 171381 36231149 ~ 36231276 (-)
G1805922 LOC106582360 non-coding downstream 2145 36055355 ~ 36055699 (-)
G1805920 NA non-coding downstream 4836 36052792 ~ 36053008 (-)
G1805916 NA non-coding downstream 12243 36045355 ~ 36045601 (-)
G1805910 NA non-coding downstream 20690 36036953 ~ 36037154 (-)
G1805906 NA non-coding downstream 24038 36033433 ~ 36033806 (-)
G1805937 NA non-coding upstream 25568 36085336 ~ 36109814 (-)
G1805983 NA non-coding upstream 158973 36218741 ~ 36219471 (-)
G1805967 tsn non-coding upstream 183431 36243199 ~ 36247813 (-)
G1806014 NA non-coding upstream 220618 36280386 ~ 36287356 (-)
G1806050 NA non-coding upstream 283389 36343157 ~ 36345530 (-)
G1803964 NA other downstream 931011 35126479 ~ 35126833 (-)
G1801331 NA other downstream 3097359 32958322 ~ 32960485 (-)
G1801352 NA other downstream 3104174 32950467 ~ 32953670 (-)
LOC110501806 sema5b other upstream 517980 36552698 ~ 36837583 (-)
G1806393 NA other upstream 875890 36935658 ~ 36936087 (-)
G1806449 NA other upstream 983793 37043561 ~ 37112474 (-)
G1807020 LOC105030512 other upstream 1700203 37759971 ~ 37760248 (-)
G1807750 LOC106582372 other upstream 2133654 38193422 ~ 38195096 (-)

Expression


Co-expression Network