XLOC_037268 (si:ch211-125e6.14)


Basic Information

Item Value
gene id XLOC_037268
gene name si:ch211-125e6.14
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33222911 ~ 33223829 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073348
TAGGCCAAGATGAGAAATGCCCCTGTGGATGGAAAAATTCTGGCTCTCGATGCTTTAAGTTTTTCTCTGAGTCAGTTGACTGGATCACAGCAGAGATAAACTGTCAAAGTCTTGGAACGAATCTTGCTTCTATTCAAAACAAAGTGGAAAATGATTTTCTGCTGAGTCTGGTGCCTGATTCCACACGCTGCTGGATTGGTGGTCATGATGGTGAACAAGAAGGACAGTGGCTGTGGACTGATGGATCTGTGTATAATTATACAAACTGGTGCCCTGGAGAGCCTAACAACAACAACGGGAAAGAAAACTGCTTGGAGATCAACTGGACTTCAAACCGCTGCTGGAACGATCAGCGCTGCTCAACCTCAATGGGCTGTTTGTGTGGTAAAAAACTATGAGGTTGAATGCAGGCATCTTGTTTCAATTACACTGATTGTCCTCCATTTACTTTTACCAACACCATCTTTACAAAAATGAAATTCTGAAATTAAACTTTACCTAAATATATTCTCAATACTTTTTCTGTAACACTCTCCGAATTAATAAAAGCAAAGCAAATA

Function

symbol description
si:ch211-125e6.14 Predicted to enable signaling receptor activity.

GO:

id name namespace
GO:0038023 signaling receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-38 Predicted to enable signaling receptor activity.

Ensembl:

ensembl_id ENSDARG00000094183

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073348 True 560 mRNA 0.40 4 33222911 33223829

Neighbor

gene id symbol gene type direction distance location
XLOC_037267 si:ch211-125e6.13 coding upstream 1241 33220342 ~ 33221670 (+)
XLOC_037266 si:ch211-125e6.12 coding upstream 4642 33216945 ~ 33218269 (+)
XLOC_037265 si:ch211-125e6.11 coding upstream 13252 33207574 ~ 33209659 (+)
XLOC_037264 dop1b coding upstream 27325 33174064 ~ 33195586 (+)
XLOC_037263 dop1b coding upstream 53696 33154841 ~ 33169215 (+)
XLOC_037269 lectin coding downstream 13015 33236844 ~ 33238249 (+)
XLOC_037270 BX545856.2 coding downstream 20369 33244198 ~ 33245755 (+)
XLOC_037271 usp9 coding downstream 37501 33261330 ~ 33321040 (+)
XLOC_037272 ddx3xa coding downstream 110672 33334501 ~ 33354738 (+)
XLOC_037273 nyx coding downstream 133182 33357011 ~ 33361199 (+)
XLOC_037261 BX511259.1 non-coding upstream 140730 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 327811 32891897 ~ 32895100 (+)
XLOC_037254 NA non-coding upstream 685527 32536746 ~ 32537384 (+)
XLOC_037252 NA non-coding upstream 873886 32344883 ~ 32349025 (+)
XLOC_037249 NA non-coding upstream 984802 32223695 ~ 32238109 (+)
XLOC_037276 NA non-coding downstream 502854 33726683 ~ 33764177 (+)
XLOC_037279 NA non-coding downstream 773313 33997142 ~ 34008566 (+)
XLOC_037285 NA non-coding downstream 1062925 34286754 ~ 34296124 (+)
XLOC_037287 NA non-coding downstream 1147031 34370860 ~ 34378332 (+)

Expression


Co-expression Network