G1816153


Basic Information

Item Value
gene id G1816153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 46417535 ~ 46417986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077760
accatgcagggtccatgttctatcctctctactagtggtaccatgcagggtccatgttctatcctctctactagtggtaccatgcagggtccatgttctatcctctccactagtggtaccatgcagggtccatgttatatcctctccatcatggtaccatgcagggtccatgttctatcctctctactagtggtaccatgcagggtccatgttatatcctctctactagtggtaccatgcagggtccatgttatatcctctccatcatggtaccatgcagggtccatgttatatcctctctaatagtggtaccatgcagggtccatgttctatcctctctactagtggtaccatgcagggtccatgttatatcctctctactTGTGGTActatgcagggtccatgttctatcctcactactagtggtaccatgcagggtccaagttatatcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106579761

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077760 True 452 lncRNA 0.48 1 46417535 46417986

Neighbor

gene id symbol gene type direction distance location
ints6 LOC106582497 coding downstream 260563 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 389029 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 691141 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 829823 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 838629 45550854 ~ 45578906 (-)
spopla spopl coding upstream 451845 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 624239 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 668885 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 752417 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 1059642 47476398 ~ 47553609 (-)
G1816143 NA non-coding downstream 7022 46410245 ~ 46410513 (-)
G1816131 LOC106584099 non-coding downstream 17243 46399924 ~ 46400292 (-)
G1816121 NA non-coding downstream 23833 46373197 ~ 46393702 (-)
G1816097 NA non-coding downstream 65246 46352053 ~ 46352289 (-)
G1816012 NA non-coding downstream 142368 46274516 ~ 46275167 (-)
G1816180 NA non-coding upstream 68387 46486373 ~ 46486592 (-)
G1816189 NA non-coding upstream 74841 46492827 ~ 46493793 (-)
G1816332 NA non-coding upstream 120405 46538391 ~ 46538623 (-)
G1816423 NA non-coding upstream 278530 46696516 ~ 46698947 (-)
G1816433 NA non-coding upstream 292981 46710967 ~ 46713006 (-)
G1815615 LOC106582489 other downstream 576553 45838750 ~ 45840982 (-)
G1814480 NA other downstream 1743647 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1864115 44473683 ~ 44553607 (-)
G1812404 NA other downstream 3739775 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 3812515 42603998 ~ 42605768 (-)
G1816841 NA other upstream 807565 47225551 ~ 47226646 (-)
G1816929 NA other upstream 983136 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1053308 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1644063 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1850801 48268787 ~ 48291496 (-)

Expression


Co-expression Network