trnai-aau-85


Basic Information

Item Value
gene id trnai-aau-85
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 31746158 ~ 31746451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnai-aau-85
ggccggttagctcagttggttagagcgtCGTGCTAATAACGCGAAGGTCGCGGGTTCGATACCCGTACTGGCCA
>TU2371350
AAGGTCGCGGGTTCGATACCCGTACTGGCCAAACATTTTACAACATATTATATTTCTACCATTGCCAGAAGGTATTTATTGAATTACCCTTTTGAAGACAATGAAAACAGGGTTCGGCTAACAGCCTCTGTCTTAACCTAATCATAATATGATTTCACGATCTGTCATATCATTCAGTGAGTGTGTACTGCTATCTACTGCTGTAATCATTTGCCGAGATGCATATTTGTCATGCAAAATATGTATCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-aau-85 False 74 mRNA 0.58 1 31746158 31746231
TU2371350 True 251 lncRNA 0.37 1 31746201 31746451

Neighbor

gene id symbol gene type direction distance location
LOC110507953 ngef coding upstream 6744 31715386 ~ 31739414 (+)
LOC110507957 LOC106581354 coding upstream 64251 31667205 ~ 31681907 (+)
cab39 LOC106581356 coding upstream 88117 31648232 ~ 31658041 (+)
LOC110507191 LOC106581343 coding upstream 117373 31586856 ~ 31628785 (+)
LOC110507192 LOC106581359 coding upstream 158496 31502572 ~ 31587662 (+)
trnaw-cca-60 NA coding downstream 911 31747142 ~ 31747213 (+)
trnag-ucc-233 NA coding downstream 2050 31748281 ~ 31748352 (+)
efhd1 LOC106581350 coding downstream 2445 31748676 ~ 31770765 (+)
LOC110507951 LOC106581346 coding downstream 107765 31853996 ~ 31868448 (+)
LOC118944767 NA coding downstream 124509 31870740 ~ 31871707 (+)
G2073902 NA non-coding upstream 60733 31685041 ~ 31685425 (+)
G2073891 NA non-coding upstream 81044 31664857 ~ 31665114 (+)
G2073875 NA non-coding upstream 98330 31645480 ~ 31647828 (+)
G2073859 NA non-coding upstream 150726 31595166 ~ 31595432 (+)
G2073703 NA non-coding upstream 246720 31491575 ~ 31499438 (+)
G2074054 NA non-coding downstream 43804 31790035 ~ 31790268 (+)
G2074064 NA non-coding downstream 60762 31806993 ~ 31807307 (+)
G2074113 NA non-coding downstream 92546 31838777 ~ 31839036 (+)
G2074117 NA non-coding downstream 94743 31840974 ~ 31841328 (+)
G2074124 NA non-coding downstream 99346 31845577 ~ 31845795 (+)
G2072515 NA other upstream 1474161 30270111 ~ 30271997 (+)
G2072178 NA other upstream 1731334 30011465 ~ 30014824 (+)
G2071807 NA other upstream 2105859 29638879 ~ 29640299 (+)
LOC110507925 LOC105015878 other upstream 2218798 29398701 ~ 29609924 (+)
LOC110507926 LOC106581290 other upstream 2439026 29301663 ~ 29353272 (+)
G2074226 NA other downstream 219787 31966018 ~ 31974065 (+)
G2074227 NA other downstream 222306 31968537 ~ 31976501 (+)
G2074502 NA other downstream 450582 32196813 ~ 32197204 (+)
G2074577 NA other downstream 565759 32311990 ~ 32312276 (+)
LOC110507983 LOC106581345 other downstream 701837 32270206 ~ 32488659 (+)

Expression


Co-expression Network