LOC110507235 (LOC106581497)


Basic Information

Item Value
gene id LOC110507235
gene name LOC106581497
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42398689 ~ 42416136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965239.1
gagtgggtgggaGCTAGACATTAGCGCTCAGACCATTCCTTTGATTCTCACAACACTCCCAGCTCAGACATACAGGAGTAGTCTTGTAACGAAATGGCTTGCAACCTCTAGGATTTCCCCTACAATTGACGACTAGGATCTAACTCTATACCTAAAAAAGGGATTCATATGAGATCATTCCAGGATGTGGATTCATTTAGCCTTCCATTGACACAGAACCTTTGCTTTCAGAACCCTTTAGAAGGTCCATGCGGGTTCCTTTCATCTTGAAgagagtttggagaaaaaagatctctctctctctcctgagtgtgaagctctctccctctccagaatGAGTGTGTGTGCCGACGTCCCCTCATACCTGCGGCGGTGGCTGCTGACTGCTGTGTTTATCTTGGCCACTCTGCTACCAGGAACCAGTGGCTGCCCCAAATCGTGCGCGTGCTACGTTCCCACCGAAGTGCACTGTACCTTCAGATATCTGACCGCAATACCAGGCCAGATCCAGACGGCTGTGGAAAGAATTAACCTAGGGTATAACAGTATAACCGTATTGAGGGAGAATGATCTGTCTGGGTTGAAACACCTGGAGCTGCTGATGCTCCACAGCAACACCATCCACAGCATCGCTGACAGGGCCTTTCAAGACCTCAAGTCCTTACAGGTCCTGAAGATGAGCTACAACAGAGTGAAGGAGATCAACAAGGACATCTTCCAAGGCCTGGAGGGACTGGTACGACTCCACATGGACCACAACCGCATCGAATTCATCAACCCGGAGGCGTTCTACGGTCTCACCACATTACAGCTGGTCCACCTGGAGGGCAACCTGCTCCAGCAGCTCCACCCGGATACCTTCATCACGCTGAGGCACAGCCAAGTGTTCAAGGTGTCCTCCGTCAGGAACATCCACCTGTCTGATAACCTCCTCGCCAGCCTCCCCAAAGACGTCTTCACTGGCTGCTCTCAGCTGGAGAATGTCTATCTCCACGGCAACCCCTGGTCCTGCGACTGTCGCATGGCTTGGTTCCCAGAGTGGGCGGAGAGAAATTCAGCTGTGCTGAAATGTAAGCGAGACAGGAAGTTTGCCAGAGGTCAGGCCTGCCCCATCTGTGAGACCCCCGCTCCCTCTAGAGGCAAGAGCCTAACCCAGCTTCCCCGTGATGCCTTCACCTGTACCAAGCCCTGGATCCACCCCCATCTGAAACAGAGGAACGTCAGCCTGGACGAGGGGGATTACACCCCTGTCTCGCCCCGGGACTTCATCGCTCCCATTGGATCTCTGCAGATGAATCTGACAGCTCAGTTCCACAATGACGCTAGCCTTACCTGCACAGTCCAGAGACCATCAGCCATGGAGAACCTGACTCTAACCCAGGttgaggagggggagaagaacgTGACCATGCTCTCCACCACCATCTCTACATGGCTGGTTTGTAATATTGACTATGAGCACATCCAACAGCTCTGGCGCATCCTGGCTACGTACAGTGACGTTCCCATGAGGCTAGAGAGAGGGTTGATGCTCTCCAGGACCCCAGACATGATCTACAAGTACACCCAGATCAGACCAAAGGAGGGACATGACGAAATCCACACAGACATTGAGGCTGAGATTAAGGCTTCACCCGCGTGGATGATGCAAGGAGAGGTCAACTTTCAGCTGGACCGCACTACGACCACATTCTCCACCTTGCACATTAAGTACAGGTCAGTGGTCAACCTGCGTGTGGAGAACAAGGTGTCACAGAGGAGGGACCGTTACAGCTGGACCATCATCAAACGAGACAACCAGACCCAGACTGAGCACTCTGTCCTCATAGGTGGGGTGGTGGAGCTCAACTGCAAGACCTTTGGGGAACCAAAACCCTCTGTAGAGTGGATCTTATCGGACGGCAGTAAGGTGCGGGCACCCTACTCCAGCGAAGACCGCAGGATAGTGATCACCGCTGATGGCAGGCTGACCCTGAGAGGAACAGACACCTCAGACACTGGGCTTTACCGCTGCATCGCCACTAACTACCTGGACGCAGACGTGCTCAGCTTCCGGGTCACCGTGCTGTCTCccgatgtggaggaggaggaggtcaacGGGGTCAAGCTCTCACGGCCACTGGGCCAGAGCCTGGTTCTAGACTGTGGGTCCACAGGCAACCCTGATGCCTCGGTCCAGTGGATTCTACCTGACCACACAGTGCTGGATAAATCCTATGGGAACAGGAAGCTCTATAGGAATGGGACTCTAGGAATAAAAGATCTGACCTCCAGAGACCGGGGATTTTACAGGTGTCTCAATGCTAACTACCTGGGGGTGGACCTGTTGACGTCCCAAGTGACAGTCACTGGGGAGGGGTCCAGGAAGGTGACAGTGGTGGATAGAGAGGGGTCAGGGGCGGAGGCTTTGTTTGAGGTTGACAgggccatagaggagagggaggattcCCACAGTGAGGTCCCTTCCTCCAGCCCCTCTGACAGAACTATCCAAGAGTCCAGGACCATCACATCAGACAGGCCCTACCCCAGACTTAGGTCTTCCTCTCAGGGCAGAGGATCAGCGGGCTcttgggggagaaggaggagccCAGCCAGCAGCAGGCGCATATGGAGCAACAGGAGGGTATTTGATCAAGCCTCCAGGAAAGTAGACCTCCAGAGATTTGCAGAGTTCATGAAGAAGGCCCAAGGTGGTTCAACAACAAAGACAAAGAGTGTGAAAGAAAAAGGAGATTCAGAGCCTGACATGTCTGGGGACCGGGATGCTGGATCTGGGGAGGGTCTGTCTCATGAAGACGGACTCATTGTTTTACCAAGCAGCGTCATGCCAACCACAGATTCTCCAGATGAAAGTATGATGGGTGTAACTGCAAGCATAGAGATTTTAAACAATCAGAATAATGTCATGGCAACCACCGACAACAGTGAAACCAGTGTCATGAGAACCATGGAGATCCCAAATGACAGTCGGACTAGTTTCACTGTAACAACAGAAAATACTGACAGAGTGACAACAGTGACGACAGATTCATACACCCGGTCAGACGCCACACCCATCGAGTCCACATTCACCCACAGCAGCCACAGCACAGGAAGTATCAATGAAACTCAAGGTGAGGCCGTCTTTCAATACAGCCCCAGAATTAGTGGGTCTAGTGGTGAGTCGTACTCTTTGGAGAGGAACACGACAGTACCTCTGAGACAACCCGTCACGCTCCTCCTCGCCGTGACCAACACCACAGACGAGACACAGATCCTGTTCTCCAGAGAAACACCTGCAGAACCAGATACCTCCACCGGGGCGGCGCTATCGCTCCTCACCGACCCCAATGTCACCCCCATGATGGACAGTCCCAGATCACCCAACAGAGAGCCTGAGATCCACACAGCCACTGACCCAGACAGCCAGACCACCTTCACCGCAGTcaccaccacagagagagagcaggatgagATCACCTTCCACACCACCCAGAAGATCAAGTCCCCCCGTCTGCCTGCAGGCTCCACCATCATCTCCCGCCAGCAGATCCATATCATCCCTCCTATGaagggcagaggaggaggaagaggagggggccGGAGGAGGAACTTCCCTGGCAGGAGGAGGTTCATCAAGCCCAACCGGATCACAGACATCCAGTCCATCCTGAACAAACTCAAACAGCCTAACATTGTGAAGAAGCAGGGCAGCAGCACAGTACCCTACACTATGGAGCTGACCACGGACTGCGACTGTGATGAAGATGAGAAGAAGATAGGTGGTCAGCGGGTCGTCACACCAACAACATCTCCTAAAACTCCCAACGTCCCTAGCTCCTCTCTAGGAAGAACAGAGAGACCGACCACCACATACTCAACAGAATCCCCCACCACAACCACCCAGCCCACCTCCACTCACTCTCagtcccccaccaccacccagccCACCTCTACTCACTCTCagtcccccaccaccacccagccCACCTCCACTCACTCTCAGTCCCACTCCACCACCCAGCCCACTTCCTCTCACTCTCAGTCCAGAGGTGAGGTATCCAGCAGCTACATGACCTCCACTAATGCCCCAGAGTTTGACCCAACACACAACCCTATGACGAGCACAACAGATGAACCAACAACCTCCACCATCACAACCACAATTGCCTCCAAGATCGTCCGTGGTAAGATCATCTGGGGCAAGCTGTTTGGgaacagggacaggcagagggaAATAGTCAACAGACTACGTAAACCAGCCAGGCCCTCAACCACCCCAGAGGGCTCAACAATAGTCCAACCAACCACCCCCACAACTACAACCACAAACGCACTTCCCACCCAGCGGTCTCTGGCTGAACCTGTGACCGAGTCACCGTCTAGAGCAGGTAAACACAGAGAGACCCCAGAAATCTCATCAGACGATGACTATGGAGATTCATTGCCTGACTCTGAGGCCTCGACCACACCTCAGCCTGGCACTAGCCGTGGAACTACAACCCCAGCCTGGCACTGCAGGTACTCCCCCACCACAGAGTCTTCCCCAGACACCCTGACCATCGCCTCCCCACCTGCCCCAAGAGAAGACACAGATGAGGCCTCGTCCTCTGTGTCTGAATCTGGAGGGTCAGCGGGGTACCTATCCCGTAGATTTGGGGGAAACCGGAGACCAAATGGCGGGTCAGGGGGGTACCTATTCCGTAGATTTGGGGGAAACCGGAGGCCAAATGGAGGGTTAGGGGGCAGGAGGCCTTTCAGGGGCAGgaggcctttaaaaaaaaacttaacaACTACGGAAGCCCTCAGCACCACCATAGAATCAACAGAGCCTTCAACCACCATGGAGACCACCATGGAGACCACCACATATCCCACAGAAACCACCATGGAAACCACCATGGAGACCACCATGGAGACCACCACATATCCCATAGAAATCACCATGGAGACCACCACATATCCCGTAGAAGCCACTATGGAAACCACCATGGAGACCACCACATATCCCACAGAAACCACCATGGAGACCACCACATATCCCACAGAAACCACCATGGAGACCACAATGGAGACCAACACATATCCCTTAGAAACCACCATGGAGACCACCATGGAGACCACCACATCTCCCACAGAAACTACCATGGAGACCACCATGGAGACCACCACATATCCCACAGAAACCACCATGGAGACCACCATGGAGACCACCATGGAGACCACCACATCTCCCACAGAAACCATAATGGAAACCACCACATATCCCATAGAAACCAGTATGGAAACCACCATGGAGACCACCACATATTCCACAGAAACCAGTATGGAGACCACCATGGAGACCACCACATATCCCACAGAAACTACCATGGAAACCACCGTGGAGACCATCACATATCCCAAACATACCGTCTCGGTCTCCAACCCCCTGTACAAGCCGTCCAGAGAATCAGATAGGTCTGCAGTGACTGTGTCCACTGACATGACCTCCGTGGGAGAAACCACCACAGACTCCGACTCATACGATAATGAGAACTGGACAGATGAGATGAAGTCCTCCACTAACCGTCCACGAGCCTACACTTTCACCACCAGGCCCAGAATGACCTCTACCACAACTTATCCAACCACCACCTCAAGGCCTTACACTACATCATCAACGCGCGTCCAGACTAACATTGACCCCATCAGAGTGAACACTAACATCAAGCTCCCGTCAGGGAGAGACAGCCGTTACCAAATCACACAGAGACCCATGATCAGGAGAACCAGGCCCAAGGTGTCCAGTAACAGGGCCAGCAGTGGCCCAGACAAGACCCTGACCTTTGACACACTGACTATTCTGGAAGCAGAGCAGGGGCACGCCAAAGCCCCCTATAGCAGCAAGGACATAGACGATGCCATCTCCAACGCCTATACCCACATCACCGGCTATGATACGACAACAGCTAACATTGTGGGCTTTGAGCGGTCCACCAAGGACATGCTCACCAAGCCCAGGATCGTGGGAGGCAACGCTGCCAGCTTCACTGTCCTGTCCAACTCAGACGCCTTCCTGCCCTGTGAGGCCGCGGGCAGCCCTGAACCCACTATCAGCTGGAAACGCTTCTCTTCAAGCACTGGAAGCACAATGACCATCAACGGCAAGATGAGCAAGTTTGAAGTGTTCCCGAACGGCACTCTATCCATCCAGAACGCAAACATCAAAGACCGTGGTCAATACCTCTGCCTGGCTGAGAACGATCAGGGGTCGGACAAGCTCCTGGTCACCCTGTCCGTAGTGGCCTACCCCTCACGCATCCTGGAGCCCAAGGTACGGGAGATCAAATCCCACTCTGGGAAGACAGTGGAGATGAAGTGCAAGGTGGAGGGCCGCCCCACCCCTCTGGTCTCCTGGATCCTGGCCAACCGCACCCAAGTCAGGGGCCACAACTCGGACCCCAGAGTGTCAGTGACCCCAGAGGGCACTCTGCTCATCAAGCAGGTGTCTGTGTTTGACCGGGGCCACTACAAGTGCATCGCCAGTAACCCAGCAGGAGCCGACACTGCCACTGTCAGACTGCAGGTGGTGGCAGCACCTCCTGGTATCCTGGAGGCCAAACGACAGCAGGTCCAGACCGGTGTGGGTCAGAGCCTGTGGTTACCCTGTACCGCTCAGGGCAGCCCCCAGCCCACCGTGCACTGGGTCCTCTATGATGGAACGGCAGTGCGGCCCCTGAAGCCCTCTGTGGACCCCAGGGTGTCTGTGTCCACTAACGGGACGCTCCACCTGACCAATACGGCCGCCACGGACAGTGGAAAGTACGAGTGCATCGTCACCAGCTCTACAGGGTCGGAGCGCAGGGTGGTGACGCTCACtgtggagaagaagaaggagatggCTCCTGAGATCGTGGAGGCGTCACACCGCAGGACAGAGCTGGCGTATGGGGACCAGCTGAGGCTGAACTGCTCAGCCACCGGGGACCCCAAACCCAGGATCATCTGGAGACTACCGTCCAAGGCTGTGGTGGACCAGTGGCACAGGATGGGAAACCGAATCCAGGTCCTGGACAACGGCACCTTGGTCATGGACTCTGTGAGTGACAAGGATGCCGGGGACTACCTGTGTGTGGCGCGCAGCAAGGTGGGAGACGACCTCCAGCTCATGAAGGTCACTGTGTCCATGAAGCCAGCCAAGATCGAGCCCAAGATGTACGGCAAGAAGCAGGTCCCCTACGGCAACGACCTGAAGGTGGACTGTAAGGCATCTGGAACCCCGGAGCCAGAGATCTCCTGGGGCCTGCCGGACGGCACCATGGTCAACAGCGCCCTGCAGTCAGACAGCAGCAGTGGAGGGGGACGCGTACGGCGATACATCCTGTTTGAAAATGGCACACTCTATCTTAATCAGGTGGGCATGGCGGAAGAGGGAGACTACACATGCTACGCCGAGAACCAGTTGGGCAAGGATGAGATGCACGTCCACATCACCGTGGTGACGGCAGCGCCACGGATACGTACGCCCAGCCGGACCTACGCCCAGGTGAAGCCTGGAGGCAAAATCCGCTTTGACTGCGAAGCTACGGGCGAGCCCAAGCCCAAAATCCTGTGGATGCTCCCTACTAACGACATGATTGCAGCCTCCAACGAACGCTATCTGATGCACATCAACGGCTCCCTAGACATCCAGGATGTTAAGCTGGTGGATGCTGGGGAGTACGTGTGCATGGCTCGCAACACCGCCGGGGATGACAGCAAAGTTTACAAGATAGATATCGATGGCAACCCTCCGGTGATCAACGGCAACTCCCAGAACAGGATCGTAGTGAAAGACACGGCCACCAAATACTCCAGGAAGTTCATAGACTGCAAGGCCACTGGAGACCCGCTTCCCAAGATCACCTGGATCATGCCGGATAACATCTTCCTGAACGCTCCGTACTTCGGCAGCAGGATCAACGTCCATCACAATGGAACTCTCGAGTTCCGGAACGTCCGTCCGACGGACATGGCGGAGTTCGTCTGCATGGCGAGGAATGACGGCGGAGAGGCAGTGATGGTGGTACATCTGGAGGTCACTGACATGCTCCGAAGGCCTATCTTCAAGAACCCCTTCAACGAGAGAGTAATGACCCGTATGGGGAAGACCACAGTCATGAACTGTTCTGCatatggtcacccaacaccagaGATCATCTGGCTGCTACCTAACGGAACCCGCTTCACCGGGGGCTCCAACCGGGGCTCACGCCAACACCTAGGCAACGACGGAACCTTCGTCATCTACAACCCCAGCAAGGAGGACGCTGGGAAGTACCGCTGTGCCGCAAAGAACTCAGTGGGCTACATTGAGAAGCTGATAGTTCTGGAGGTGGGCCAGAAGCCATTAATCCTCACCAGGCCCAGAGGGATCATACGCAGTGTGTCTGGGGACCCTCTGTTCCTTCACTGCCTGGCTGATGGCAGCCCCAGACCCCGGATATACTGGACCATCCCTGGAGGCCACACCTTGGCCAGACCGCAGGTCCATGGGCGCCACCAGCTGATGGAGAATGGGACCCTGGTTGTCAAGGACACCACCCTCCACGATCGGGGAAACTATGTGTGTCGGGCGTCGAACGACGCTGGCGAGGCTGTTCTCACAGTGCCAGTCATCATCATCGCCTACCCTCCCCGCATCTCCACGGGACCCCCTCCCACCGTGACAGCGATGGCGGCGGCGCCCATACAGCTCAACTGTGCTGCCATCGGGATCCCAAAGCCAGAGATTACCTGGGAGCTGCCTGACCGCTCTGTGCTCTCCACGGCGGGAAAAGGGCGGCCCACGGGCAGCGAGCTGCTCCACCCTCAGGGCACGCTGATCATCCAGAGACCCACCACAGCAGATTCTGGCACCTACAAGTGCCTTGCCAAAAACCACCTGGGCACGGACTCACGGGTCACGTATGTACGTGTGCTGTGAGCACCAGCGCTGACTAAAGGGGAATATAGAATCCCTGGACTATAAACTCTTAACAGACACGGTAACTTCACAGTGTTTCTTATGATGTAAAATGTCAGGAAAGACTAATTTCCACATGCGGACTTGTGAGGAGCGGGGTGTGTGGAATAGTTTGATCACGGTACAGCTCACATCAATCAACCAAGTAGCAGAACGGGATTAttaagagaaggaggagggaatggaggaGGGGACGGAGGAGGGGACGGAGGAGGGAGCGAGGAAAAATAGAAGCTGTACAGAGGAGGGTCTGTTCTTTGCCAGGAAAGTTGTGACTAGCGAGGTGTTATTCTTATTATAACAGAGTCAGAGGTCTGGAAACGCACGGTTGGTTCTCATTTGAGGTGTTTTTAACAAGGGGCTGGAAGGTGGGTCTTACAGTGAGGCTACTTGTTGAGTGTTTTGACCAGACACTTTACTATTACAGCctgtggggagagaggaagagagaaactcACTATATTCCCTCTGGACACTTCCTCgatgtttatttttttggagTGTTGGTAATGACTCATTTGCTGCAATGACAGAAACATTCTATTATCAGAATGTTTCTGACTATTTTGCTTGTCAAGACACATTTCATATTTCTTGTGAATAAATCTTTATTAACAGGCAGTATATTTTAATGAATTCTgccaaatatacatttttaatatACATTTTACACTGGATTATCATACAGTTTTTCAAAACAAATTTCTCACATTTCTAactgtttatattttttaattagCATTGTTAGTttgtcatgttgttgtcttaTCTTCCCCCTCTCGTGGTTTGACAGTGCTTGTATCAATATAAAATGCAGGAGTTTGATTGGTGTCAATAGCGACTTTTATGGAGGTGAAAGTATCACCTGTACAGTATTCAGTGGCGTCGTATGAACTGTCACTGAAAGTAAATGCATTATTGGTTTTATGTAATAACATTCCTTTTGTAACTATCATCTACTTTGTGAATCAATGGTACGCGGGAGATGAAATTAAACCAAAGATGGAATGTT

Function

NR:

description
immunoglobulin superfamily member 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965239.1 True 9980 mRNA 0.54 11 42398689 42416136

Neighbor

gene id symbol gene type direction distance location
LOC110507284 sucnr1 coding upstream 156687 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 616853 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 826767 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 892078 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 1194994 41194800 ~ 41203695 (+)
LOC110508060 LOC106581495 coding downstream 68720 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 75324 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 86406 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 94683 42510819 ~ 42515563 (+)
LOC110508057 LOC106581503 coding downstream 158446 42574582 ~ 42629238 (+)
G2084294 LOC106600457 non-coding upstream 15757 42382680 ~ 42382932 (+)
G2084285 NA non-coding upstream 21907 42375833 ~ 42376782 (+)
G2084274 NA non-coding upstream 35875 42362606 ~ 42362814 (+)
G2084265 NA non-coding upstream 41957 42356511 ~ 42356732 (+)
G2084264 NA non-coding upstream 42974 42355490 ~ 42355715 (+)
G2084334 NA non-coding downstream 5302 42421438 ~ 42421675 (+)
G2084340 NA non-coding downstream 9007 42425143 ~ 42425343 (+)
G2084353 NA non-coding downstream 18184 42434320 ~ 42434558 (+)
G2084357 NA non-coding downstream 35287 42451423 ~ 42453488 (+)
G2084362 NA non-coding downstream 43054 42459190 ~ 42459407 (+)
G2084156 NA other upstream 137052 42260523 ~ 42261637 (+)
G2083851 NA other upstream 286653 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1185917 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1413835 40981370 ~ 40984854 (+)
G2084659 NA other downstream 647152 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1116134 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1316259 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1702087 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1991917 44408053 ~ 44410050 (+)

Expression


Co-expression Network