LOC110508061 (LOC106581496)


Basic Information

Item Value
gene id LOC110508061
gene name LOC106581496
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42491460 ~ 42492431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965041.1
ATGGCTATATCAAGTCTCTACTTCCTGTTGTTCATCCCGGCCCTCATCATCAATGGGGTAGCAGTCTGGGTCTGCATGCAACTTCGTTCAAAGTCCACCTTCATGGTGTATCTGAAGAACCTTCTGGCCGCTGACCTTCTCATGACCCTGACCATCCCTGTCAAAGCAGCCAATATCCTGCCCAGCACTCCACTGACTCTGAAGGCCTTTGCCTGTCGCTACTCTGATGTTCTTTTTTACCTCTGTATGTACATGAGCATCATTCTGTTGGGCCTCATCAGTCTGGACCGCTTCTTCAAGATCGTCAGGCCCTGTGGCAGGTTGTTGGGTCAGAACATTGTCTTCGGCAAAGTGCTGGCTGCTTCCATCTGGGTGGTGCTGTTGTCCACTGCTGTCATTCCAACCATGATCCTGACCAATCAGGATCCCACAAACAAGACTAAACTATTCTGTATGGCAATGAAGAGCAATGCAGGACAATATTTCCACAGTGGCGTGGTCAAATTAAACAACGCAATCTTCTGGGTGGTGTGTGTTCTTATTTGCTTCTGCTACATGTGCATAGCAAGGAAGGTTTTTCAATCATACAGGAAATCAGGAAGCAGCAATGACGAAGGGAGGCATAAGACCAAAGTGCGTGTGTTTTTGGTTCTGGTGGTTTTCCTGACGTGTTTCGGACCCTACCACGCCATACGGCTCCCCTACACCTTGCTTCAGGTTACCTCAACAACCAGCTGCACTAAGGTCACCTTACAGATCTCTAAGGAGTTCACCTTGTGGATGTCAGCCACGAACGTCTGTCTGGACCCTCTCATCTACTTCTTCCTCTGTAAGCCCTTCAGGATCACCCTGTTCAAGACGCTCCGTCTCCCACCTGGGACCTGTAGCTGGCTCACTGGGAGAGGACCCAACACAATAGAGGATCAGACCCCAACACAGGAGGGAGACTCCTGTGCCTGTACAGAAAATTAA

Function

NR:

description
P2Y purinoceptor 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965041.1 True 972 mRNA 0.50 1 42491460 42492431

Neighbor

gene id symbol gene type direction distance location
LOC110507235 LOC106581497 coding upstream 75324 42398689 ~ 42416136 (+)
LOC110507284 sucnr1 coding upstream 249458 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 709624 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 919538 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 984849 41485189 ~ 41507173 (+)
LOC110507283 LOC106581492 coding downstream 10111 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 18388 42510819 ~ 42515563 (+)
LOC110508057 LOC106581503 coding downstream 82151 42574582 ~ 42629238 (+)
cux1b LOC106581515 coding downstream 174226 42666657 ~ 42816758 (+)
LOC110508074 sh2b2 coding downstream 344814 42837245 ~ 42871486 (+)
G2084394 NA non-coding upstream 2432 42488803 ~ 42489028 (+)
LOC110508060 LOC106581495 non-coding upstream 3759 42484856 ~ 42492905 (+)
G2084362 NA non-coding upstream 32053 42459190 ~ 42459407 (+)
G2084357 NA non-coding upstream 37972 42451423 ~ 42453488 (+)
G2084353 NA non-coding upstream 56902 42434320 ~ 42434558 (+)
G2084397 NA non-coding downstream 3557 42495988 ~ 42497663 (+)
G2084398 NA non-coding downstream 6880 42499311 ~ 42500446 (+)
G2084400 NA non-coding downstream 9184 42501615 ~ 42501828 (+)
G2084401 NA non-coding downstream 9758 42502189 ~ 42502444 (+)
G2084407 LOC106581489 non-coding downstream 27214 42519645 ~ 42519875 (+)
G2084156 NA other upstream 229823 42260523 ~ 42261637 (+)
G2083851 NA other upstream 379424 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1278688 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1506606 40981370 ~ 40984854 (+)
G2084659 NA other downstream 570857 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1039839 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1239964 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1625792 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1915622 44408053 ~ 44410050 (+)

Expression


Co-expression Network