LOC110508068 (aldh3a2)


Basic Information

Item Value
gene id LOC110508068
gene name aldh3a2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43096643 ~ 43111668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965659.1
gttatagagcaaacaacgcaattatcacaacacctAGGTTGTATAGCTTATTTTTTTCTGCCTTGTCTTCCTCGATGATGTTACCTACGCACAGCTACTGTAGAAACGAATTGGGTTTatttttggacagattttggcgagagtgaaacctctcTCTTCGCCTCTTATTCTCTGACTGAGCTTCCTCCCCTCACCATATTTGGGAATGAAAATTCCAACCGGATGCTACggatttatacatccggtgaatcATCTGTTTCTTTGTTCTATCATCTGTGGGCACCATCAAATAGGCGGCGCCTACTTCCCAAATGGGCAAGAGTCAACCGATCTACACTTGTCATTTGACAAACCTTGCTTCTCGAGTTGGATTGACATATTGCTTAACCAACCGCAATGGTGTTCGCTGTAGTGGCCCTTCCCCCTCCGATGACGTGGTGTTACTGTTATAATTTTGTCGGATAACAGGACGAAAGCTACTGTACTGAGTGTCCCTGTTCTACCAGTCCTTGACCCAGTACGGTAGTAGTATGTCTCGGGAACAGCTGGTGGTAGAGAGGGCAAGGAGGGCCTTCCAGACCGGTATGTCGAAACCCCTGAAGTTCAGAGTTCACCAGCTTAAGAACCTGCACCGTTTCATCACAGAGAGACGCAAGGACATTGCAGACGCTGTCAATAAGGACCTTAACAAGACTGAACACAGCACAGAGTTgtttgagaccctgggtctggaAGGGGAGATCGACGTGGCTGTGGAGAGGCTAGCAGAATGGGCTGCCCCTCGGCCTGTAGAGAAGAgcctcctcaccatcttagacgaGGTATACATCCAGCCAGAGCCCCTGGGAGTGGTCCTCATCATCGGGGCCTGGAACTATCCCTGGGCAGTGACCCTCCAGCCCCTGGTCGCGGCTATTGCTGCAGgtaATGCAGCTGTGGTTAAGCCGTCAGAGGTCAGCTCTCATTCAGCCAAGGTCATGGAGGAACTGCTCCCTCTCTACCTGGACAAGGAGCTGTACCCTGTAGTGTGTGGGGGTGTCTCAGAGACCCAGGAGTTGCTGCGTCAGCGTTTCGACCACATCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCCGCAGCCCGACACCTCACCCCTGTGACCCTGGAGCTGGGGGGGAAGAGCCCCTGTTACATCGATAAGGACGTCGACCTCAGAGTTGCGTGCCGGCGTATCACCTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATTGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGGACAGAGTGGTGGAGGAGATCAGGAAATGCATCACGGAGTTTTATACGGACGACCCAAAGTCCTTCGAGGACTACGGACGCATCATTAACCAGCGCCACTTCCAGAGGGTGATGTCACTGCTCGAGGGGAGTACTGTGGCCATCGGAGGAGACAGCGACCAGTCACAATGCTACATAGCCCCCACGGTGCTGAAGGACGTGACAGGGGGCTCCAAGGTGATGCAAGAGGAGATCTTTGGTCCCCTGCTCCCCATTGTCACTGTTAGTGGAGTGGACGAGGCTATACAGTTCATCAATGAGAGAGAGAAGCCTCTGGCCCTCTACGTGTTCTCACCTGACAACAAGtTGATCAGGAGGGTGATAGCAGAGACTTCTAGTGGGGCCCTAGTGGCCAATGACTGTCTGGTCCATTTCACTGTCAGTGCTCTCCCCTTCGGAGGGGTGGGTAACAGTGGTATGGGACGCTACCACAGCCAGCACGGCTTTGACCAGCTCAGCCACCTGCGTGCCTGTCTCATTAAGAAGCTCAACCTGGAGGATGCCAACGCCATGCGTTACCCGCCCCACACGGCTAAGAAGCTGGGCTGGGCACGCTTCTTCCTCCTGAAGCGGGTCAACCTGCGCCGGCTCAGACGCATGGCACTACTGGCCCTGTTCTCTGCCATGACTGCCTTCATAGTACAGAGGTTCCTGCGGTGATGCTGATGTGGGGAAACTGTACGTGAGGCTCCGCCATCTTGGACCCTGATTTAGACTTGCTGGGGCAACAGTTATGTCTCAGTGTCAGTCATAAACATAGCAAAATTGCAATAGTTTATTTTAAATCACAATTATTTAACTCTTTTTTAGAACAAGGGTTATGAACCATTAATCATTTTAGAGGTGTTTATGATGCCAGTGAACCTGTATATTTgaggttattttttttatttttcgtaTCGTGTCTTACACATTTCATCTCTGGTGCGCTGTTGCAAATGGATTCTAACCTCAATGGAAGACTGAGTaccatgcatttgCATTATTCCTGGGAATTTCCTAAAGGAGTGCAACTGTTTTGTAATGTAGAGAATGTGCCTCTTGTTGTACTAGTTTTTATACTGATTATGTCAACAGTACTTTTATGTTTAGTATCAAAAGAAAAGTTGCCTGCCTTATATACTGTCTTAAACTGATCATCTCATTGTTCATGTTTTATTTAAGATATTAAAATGACATTTAGGCTTAGCTGtgaaataatatataaataagaCCGTGAAGAGTTATTCATTTCAAATAAAAAGTTATCTTGTT
>XM_036965658.1
TGTTACTGTTATAATTTTGTCGGATAACAGGACGAAAGCTACTGTACTGAGGTGAGATGCTACCGTGTTGCACTATTGGGGTCAACTGAAGTGCAAACGTTCGTTCAAAAATATACCAAATTTCTCTGCTGACTTTACAAGTGTCCCTGTTCTACCAGTCCTTGACCCAGTACGGTAGTAGTATGTCTCGGGAACAGCTGGTGGTAGAGAGGGCAAGGAGGGCCTTCCAGACCGGTATGTCGAAACCCCTGAAGTTCAGAGTTCACCAGCTTAAGAACCTGCACCGTTTCATCACAGAGAGACGCAAGGACATTGCAGACGCTGTCAATAAGGACCTTAACAAGACTGAACACAGCACAGAGTTgtttgagaccctgggtctggaAGGGGAGATCGACGTGGCTGTGGAGAGGCTAGCAGAATGGGCTGCCCCTCGGCCTGTAGAGAAGAgcctcctcaccatcttagacgaGGTATACATCCAGCCAGAGCCCCTGGGAGTGGTCCTCATCATCGGGGCCTGGAACTATCCCTGGGCAGTGACCCTCCAGCCCCTGGTCGCGGCTATTGCTGCAGgtaATGCAGCTGTGGTTAAGCCGTCAGAGGTCAGCTCTCATTCAGCCAAGGTCATGGAGGAACTGCTCCCTCTCTACCTGGACAAGGAGCTGTACCCTGTAGTGTGTGGGGGTGTCTCAGAGACCCAGGAGTTGCTGCGTCAGCGTTTCGACCACATCTTCTACACAGGGAACAGCACTGTGGGTAAACTGGTGATGGAGGCCGCAGCCCGACACCTCACCCCTGTGACCCTGGAGCTGGGGGGGAAGAGCCCCTGTTACATCGATAAGGACGTCGACCTCAGAGTTGCGTGCCGGCGTATCACCTGGGGGAAGTTTGTGAACTGTGGTCAGACGTGCATTGCCCCAGACTACATCCTGTGTGAACCCAGCATCCAGGACAGAGTGGTGGAGGAGATCAGGAAATGCATCACGGAGTTTTATACGGACGACCCAAAGTCCTTCGAGGACTACGGACGCATCATTAACCAGCGCCACTTCCAGAGGGTGATGTCACTGCTCGAGGGGAGTACTGTGGCCATCGGAGGAGACAGCGACCAGTCACAATGCTACATAGCCCCCACGGTGCTGAAGGACGTGACAGGGGGCTCCAAGGTGATGCAAGAGGAGATCTTTGGTCCCCTGCTCCCCATTGTCACTGTTAGTGGAGTGGACGAGGCTATACAGTTCATCAATGAGAGAGAGAAGCCTCTGGCCCTCTACGTGTTCTCACCTGACAACAAGtTGATCAGGAGGGTGATAGCAGAGACTTCTAGTGGGGCCCTAGTGGCCAATGACTGTCTGGTCCATTTCACTGTCAGTGCTCTCCCCTTCGGAGGGGTGGGTAACAGTGGTATGGGACGCTACCACAGCCAGCACGGCTTTGACCAGCTCAGCCACCTGCGTGCCTGTCTCATTAAGAAGCTCAACCTGGAGGATGCCAACGCCATGCGTTACCCGCCCCACACGGCTAAGAAGCTGGGCTGGGCACGCTTCTTCCTCCTGAAGCGGGTCAACCTGCGCCGGCTCAGACGCATGGCACTACTGGCCCTGTTCTCTGCCATGACTGCCTTCATAGTACAGAGGTTCCTGCGGTGATGCTGATGTGGGGAAACTGTACGTGAGGCTCCGCCATCTTGGACCCTGATTTAGACTTGCTGGGGCAACAGTTATGTCTCAGTGTCAGTCATAAACATAGCAAAATTGCAATAGTTTATTTTAAATCACAATTATTTAACTCTTTTTTAGAACAAGGGTTATGAACCATTAATCATTTTAGAGGTGTTTATGATGCCAGTGAACCTGTATATTTgaggttattttttttatttttcgtaTCGTGTCTTACACATTTCATCTCTGGTGCGCTGTTGCAAATGGATTCTAACCTCAATGGAAGACTGAGTaccatgcatttgCATTATTCCTGGGAATTTCCTAAAGGAGTGCAACTGTTTTGTAATGTAGAGAATGTGCCTCTTGTTGTACTAGTTTTTATACTGATTATGTCAACAGTACTTTTATGTTTAGTATCAAAAGAAAAGTTGCCTGCCTTATATACTGTCTTAAACTGATCATCTCATTGTTCATGTTTTATTTAAGATATTAAAATGACATTTAGGCTTAGCTGtgaaataatatataaataagaCCGTGAAGAGTTATTCATTTCAAATAAAAAGTTATCTTGTT

Function

symbol description
aldh3a2 Enables aldehyde dehydrogenase (NAD+) activity; long-chain-alcohol oxidase activity; and protein homodimerization activity. Involved in several processes, including hexadecanal metabolic process; nervous system development; and terpenoid metabolic process. Located in peroxisome. Implicated in Sjogren-Larsson syndrome.

NR:

description
fatty aldehyde dehydrogenase-like

GO:

id name namespace
GO:0006081 cellular aldehyde metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity molecular_function

KEGG:

id description
K00128 ALDH; aldehyde dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965659.1 False 2594 mRNA 0.49 13 43096643 43111668
XM_036965658.1 True 2246 mRNA 0.49 13 43097081 43111668

Neighbor

gene id symbol gene type direction distance location
LOC118944686 NA coding upstream 4454 43091149 ~ 43092189 (+)
LOC110508072 LOC105005600 coding upstream 14965 42890959 ~ 43081678 (+)
LOC110508071 LOC106603399 coding upstream 100180 42993694 ~ 42996810 (+)
LOC110508074 sh2b2 coding upstream 225157 42837245 ~ 42871486 (+)
cux1b LOC106581515 coding upstream 279885 42666657 ~ 42816758 (+)
LOC110508067 LOC106581512 coding downstream 129 43111797 ~ 43143108 (+)
LOC118944687 NA coding downstream 79109 43190777 ~ 43218309 (+)
LOC110508082 LOC106613355 coding downstream 81847 43193515 ~ 43293841 (+)
LOC110508093 ift20 coding downstream 437584 43549252 ~ 43557059 (+)
usp32 LOC106581527 coding downstream 461668 43573336 ~ 43700703 (+)
G2084604 NA non-coding upstream 10989 43083011 ~ 43085654 (+)
G2084660 NA non-coding upstream 31102 43064896 ~ 43065541 (+)
G2084647 NA non-coding upstream 78546 43015481 ~ 43018097 (+)
G2084638 NA non-coding upstream 106469 42988338 ~ 42990174 (+)
G2084675 NA non-coding downstream 32128 43143796 ~ 43144844 (+)
G2084902 NA non-coding downstream 71466 43183134 ~ 43183334 (+)
G2084916 NA non-coding downstream 87354 43199022 ~ 43199230 (+)
G2084920 NA non-coding downstream 100087 43211755 ~ 43211958 (+)
G2084923 NA non-coding downstream 107338 43219006 ~ 43219267 (+)
G2084659 NA other upstream 32386 43063288 ~ 43064257 (+)
G2084156 NA other upstream 835006 42260523 ~ 42261637 (+)
G2083851 NA other upstream 984607 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1589470 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1883871 41212204 ~ 41212772 (+)
G2085037 NA other downstream 420602 43532270 ~ 43532578 (+)
G2085122 NA other downstream 620727 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1006555 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1296385 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 2374969 45480328 ~ 45487737 (+)

Expression


Co-expression Network