LOC110507242


Basic Information

Item Value
gene id LOC110507242
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44100049 ~ 44101891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110507242
atgcagtcgtggGTGACAGCCTTCATCGGAGAGAACATCATCATCACTGAGACGCGCTGGGAGGGCCTGTGAATGAACTGCTGTAGACAAGCCAACATCAGGATGCAGTGTAAAGGGATGGATCTACTGGTGGCTCTAGCAGGGATGGATCTACTGGTGGTTCTAGCAGGGATGGATCTACTGGGGACTCTAGCAGGAATGTATCTACTGGTGGCTCTAGCTGGGATGCGCTGCACCTCCTGTATCCAGGACAACAACCGCGCTAAAAACCTCATCCTTATGGTGGCTGGAGACATGTCGTTTCTGGACTTTATCTGTGTATTTATCCCAGTATCCTGGATGGCTCACGGCATCATCCGTGACTTCTATAACCCTCCTGCCGATCAACACCCAGCGCACACTGCTGAGGGAGAAGCTCTACATCGGCTGGGTCACCGGGAGCCTTCCTCTTGTCCTCGGGGCTCCTCTTTGTCTGTCTCCGTGTCCCCTCCTTGTTGGGTATCTAG

Function

NR:

description
claudin-8-like

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110507242 True 506 mRNA 0.54 3 44100049 44101891

Neighbor

gene id symbol gene type direction distance location
cldn8 LOC106581534 coding upstream 2013 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 9834 44088591 ~ 44090215 (+)
LOC110508084 LOC105012849 coding upstream 30464 43873126 ~ 44069585 (+)
LOC118944688 NA coding upstream 201490 43896547 ~ 43898559 (+)
LOC110508083 LOC106581524 coding upstream 255258 43801102 ~ 43844791 (+)
LOC110508097 LOC105006673 coding downstream 9659 44111550 ~ 44232823 (+)
cadm2b LOC106581539 coding downstream 766096 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 1342014 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1378437 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1391332 45493223 ~ 45664305 (+)
G2085283 NA non-coding upstream 36904 44061807 ~ 44063145 (+)
G2085282 NA non-coding upstream 42029 44056743 ~ 44058020 (+)
G2085280 NA non-coding upstream 48153 44051095 ~ 44051896 (+)
G2085278 NA non-coding upstream 57708 44041226 ~ 44042341 (+)
G2085275 NA non-coding upstream 58098 44038808 ~ 44041951 (+)
G2085324 NA non-coding downstream 40646 44142537 ~ 44142949 (+)
G2085337 NA non-coding downstream 69392 44171283 ~ 44172182 (+)
G2085308 NA non-coding downstream 80752 44182643 ~ 44182909 (+)
G2085352 NA non-coding downstream 97161 44199052 ~ 44205726 (+)
G2085357 NA non-coding downstream 118887 44220778 ~ 44221142 (+)
G2085122 NA other upstream 366155 43732395 ~ 43733894 (+)
G2085037 NA other upstream 567471 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1035792 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1838412 42260523 ~ 42261637 (+)
G2083851 NA other upstream 1988013 41971259 ~ 42112036 (+)
G2085314 NA other downstream 16332 44118223 ~ 44119239 (+)
G2085969 NA other downstream 306162 44408053 ~ 44410050 (+)
G2087149 NA other downstream 1695208 45797099 ~ 45798593 (+)

Expression


Co-expression Network