foxo1a (LOC106581554)


Basic Information

Item Value
gene id foxo1a
gene name LOC106581554
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45703165 ~ 45791795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965061.1
GAGTAAACGGAACTGCTGCACTGAACAATAACTGCGACTGGATTGTATAAAACAAAAGTTCACCaagctgttttttgttgttgttgttattctatTCTAACTTTTCTATACTATTCGTCAACAATCAGAATAtctacatttttttgtttgttgtcatCGTCGACTTAGATGTAGTTGCTGTCTCCGCCTTGATTTGTGACTTTATATCTATGTAGTGTTTATCCGACGGACCGATATTTTTTTGTTCAGGTGGTCGACCACTACCCCCTTTTCGGTTGTTTACTTTCTGGTTGACTTCACATCACCCGCTGTGTATGAGTAACTTTGTCTTTACTAATTCTATGTGACATTTTGACGCTATTCTCGCTACTACTATGGCCGAGGCAGCCCAACAACCACAACAGGTTGAGATCGACCCGGATTTCGAGCCTCTTTCCCGGCCCCGCTCCTGCACATGGCCCCTGCCACGTCCGGAGTTCATCACCCCGGGCGACTCTAACACCTCCTCTCCCGCCCCTTCTGTCAAACAAGAACCCAGCAGCAACTCCGAATTCATCTCCAGCCTCAGTTTATTAGAAGAGACTGAAGATTACCCCGAAGAGGATCAGAAACCCACCATCCTCTGCAATGATTTCCAATGTCAGGAAAACTGCATCCACGACCACCAACAGCATCAGCAGCAGCACCCGGGGAACAACCCCCAACTCCCGCAGCAACAGGTGCTTCTGCTCTCCTCTCCGGCCGGGTCTGCATCTTCAGTAGCGGCTGCGGCCGCTGCAGCTGCCCAGAGGAAAAGCAGTTCATCTCGGCGTAACGCCTGGGGCAATATGTCTTATGCGGACCTCATAACTAAGGCTATTGAGAGCACCCCGGACAAGAGACTTACCTTGTCGCAGATCTATGACTGGATGGTGAAGAACGTGCCTTATTTCAAGGACAAGGGAGATAGCAACAGCTCTGCTGGATGGAAGaacTCTATCCGGCACAACCTGTCCCTCCACAGTCGGTTCGTCCGTGTGCAGAACGAGGGGACAGGGAAGAGTTCCTGGTGGATGCTAAACCCTGAGGGAGGGAAGACTGGGAAGTCCCCTCGACGTAGAGCAGCCTCCatggacaacaacaacagcaagttCGCCAAGAGCAAAGGACGGGCTGCTAAGAAGAAGttgTCTCTCCAGGGTGGTCCTGACGGGGGAGCAGACAGCCTCGGGGGAGGCACCTACTCCAAGTGGCCCGGCAGCCCCAACTCCCACAGCAACGATGACTTTGATGCATGGAGCGGTTTCCGGCCGCGCACCTCCTCCAACGCCAGCACGCTCAGCGGACGCCTCTCGCCCTTCACGCCCGAGGACGACCTCGGAGACGGGGACGTGCACATGGGCTACCCAGGATCCTCCGGGGCCAAGATGGCGAACACATTGCCCAGCCTGTCAGAGATGGCGAGTTCTCTAGgccaccaccaccacagctcaGAGAACGTTATGGAGAACCTTCTGGATAACCTGAACCTCCTCTCTCCCAAGAACACccaggtgggaggaggagggggtgtgggGCAGGGGTCATCCCAGAACTCCCCTTCCCCCCTAATGCAGGCCAGCCCCGGGTCAGGGGTGGGCTACCCTTcctactcctctccctccatggtCCCCCAGCAGCAGCAGGACTACCGCAAGTGTCGGTACAGCCAGGCAAGGATGAATGCTCTCTCCCCCATGTCTCCCAACCCCATGCAAACCCTGGGGGACATCAAGTCCAGCTTCAGCCCCTCGTCTCTGAGTCAATATAACTGTCCTGCTGGCCTCCTCAAGGAGCTCCTGACCTCAGACTCTGACCCCCGCGGGGACATGACGCCCTCGGTCGACACGGTGGTCTCTCAGTCTAGCGCAGGACGAAGCAGCGTTCTACCTTCGTATAATGCCTCTcagcacggaggaggaggaggaggaggaggaagagggggtggGGGTCTACACCCCCACCCACACTCTCACCCTCACCCCCACGGCCTCCCCCATCCCCAAacccaccctcaccctcacctccACAACCAAACCCCACCCACTTCTGTCTCGTCCATGAACAGCTGCAACCTGATGTCTCTGGGCAGTTTGAGCCACAGCGGTGGAGGGGGTAACGGAACCCGCCTGGGGGTTAAGAACCCCATGCAGGTGCCCTACGGTCTCTCTACCCATGTTGGACCAGGGGGGATGCCCGGTGGGTTCTGCCCCATCAACACTAACGGATTTGGGCGTCCCGGCCTGGGTCTACCCCccgccccccaccaccaccaccaccaccaccacctggagAAACTGCCCAGCGATCTGGACGACATGTCCATTGAGAGGTTCGAGTGTGATATGGAATCCATCCTTCATGACACCCTGATGGACGGAGACCCGCTGGACTTCAACTTTGAACCCATGGTGACCTCGCAGGGGTTCACGACCCATGGGGTCAAGACGACCACGCATGGCTGGGTGTCGGGGTAGAGGACGGATGGACATACACTCTCTTACATACATACACGATGGAAGGACACGTGGACTgacggacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

NR:

description
PREDICTED: forkhead box protein O1-A-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09408 FOXO3; forkhead box protein O3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965061.1 True 2621 mRNA 0.56 4 45703165 45791795

Neighbor

gene id symbol gene type direction distance location
mtus2b LOC106593344 coding upstream 38860 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 215456 45480328 ~ 45487737 (+)
usp16 usp16 coding upstream 224099 45443905 ~ 45479066 (+)
cadm2b LOC106581539 coding upstream 342510 44867987 ~ 45361689 (+)
LOC110508097 LOC105006673 coding upstream 1470342 44111550 ~ 44232823 (+)
LOC110508109 LOC105029023 coding downstream 411802 46203597 ~ 46349567 (+)
LOC118944693 NA coding downstream 560200 46351995 ~ 46354652 (+)
nek3 nek3 coding downstream 583524 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 781426 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 787825 46579620 ~ 46761993 (+)
G2087145 LOC106581545 non-coding upstream 3437 45688027 ~ 45699728 (+)
G2087144 NA non-coding upstream 15373 45687447 ~ 45687792 (+)
G2087141 NA non-coding upstream 19163 45683784 ~ 45684002 (+)
G2087139 NA non-coding upstream 23738 45679225 ~ 45679427 (+)
G2087136 NA non-coding upstream 25795 45676181 ~ 45677370 (+)
G2087147 NA non-coding downstream 7323 45799118 ~ 45801587 (+)
G2087333 NA non-coding downstream 89533 45881328 ~ 45881554 (+)
G2087346 NA non-coding downstream 106751 45898546 ~ 45898783 (+)
G2087350 NA non-coding downstream 119766 45911561 ~ 45911816 (+)
G2087389 NA non-coding downstream 169762 45961557 ~ 45961796 (+)
G2085969 NA other upstream 1293115 44408053 ~ 44410050 (+)
G2085314 NA other upstream 1583926 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1969271 43732395 ~ 43733894 (+)
G2087149 NA other downstream 5304 45797099 ~ 45798593 (+)
G2087569 NA other downstream 531289 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 702127 46493922 ~ 46499497 (+)
G2087865 NA other downstream 1235324 47027119 ~ 47028563 (+)
prcp prcp other downstream 1245247 47020501 ~ 47056921 (+)

Expression


Co-expression Network