LOC118944693


Basic Information

Item Value
gene id LOC118944693
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46351995 ~ 46354652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039992.1
tgattaaatgtgtgtttttcatagttttgatgtcttctacaatgtagaaaatagtaaaaaattaagaaaaacccttgaatgagtaggtgtgtccaaacttttgaccagtagtgtacagGCTACTACAGACTATTGCAGGTTACTACAggctactacagactactacaggctactacagactactacaggctactacagactactacaggctactacagactactacaggctACTACAGACTATTGCAGGTTACTACAGACTACTATAGGCTATTACAGGCGATTACAGACTACTACAggctactacagactactacaggctACTACAGACTATTGCAGGTTACTACAGACTACTATAGGCTATTACAGGCGATTACAGACTACTACAGGCTACTACAGGATATGACAGGCTACTACAGGCTACTACAGACTATAAAAATACTATTACAGGCTACTACAGACTATTACAGACTACTACAggctactacagactactacaggctACTACAAAAACATGCTACTACAAAAACATGCTACTACAGGCTACAGTAGCCTGCAGTAGCTAGTGCTGACAGATAACAGCTACAGGCTACAGTATATATCAATCGAAAGCACACTGAGTGACCTGAAGTGTTCTGCTCTGATCCTGATGGGACCCAGGTCAACCCATGTCATCACACCAGGGCAGAGACAAAGTGACTGCTACAACTGCAGTACAAGACAACGCACGTCTTCAGAAGCTTAGGCATCATTCTTCCTCTTCCTAAATGAACAATGTAACTCCACTTTCATATGCTCTGCGCCACATGGGACAGGTCATCAGACAGACCAAGGCAGAGACTGACTGCTAGGACTACAGGACAAGACAGACCAAGGCAGAGACTGACTGCTAGGACTACAGGACAAGACATACCAAGGCAGAGACTGACTGCTAGGACTACAGGACAAGACATACCAAGGCAGAGACTGACTGCTAGGACTACAGGACAAGACAGACCAAGGCAGAGACTGACTGCTAGGACTACAGGACATCAGACAGACCAAGGCAGAGACTGACTGCTAGGACTACAGGACATCAGACAGACCAAGGCAGAGACTGACTGCTAGGACTACAGGACAAGACAAAATGTACAACAGGAAACAAATACCGTCTTAAAAAACAGATCTTATTGTTCTGTTATGACTGCAGTCAGACAAAACTGTTCTTAATTTTCTTCTCTGACTGTCCTTATTCCTCCTCACTGACTGTCCTTATCCCTCCTCTCTGACTGTCCTTATCCTTCCTCTCTGACTGTCCTTATTCCTCCTCCCTGACTGTCCTTATTCCTCCTCTCTGGCTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCTCATCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCACCCTAACTGTCCTTATTCCTCCTCCCTGACTGTCCTTATTCCCTACTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAAATGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCACCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTAATCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCCTCCTCTCTGACTGTCCTTATTCCCTCCTCCCTAACTGTCCTTATTCCTCCTCTCTGACTGTCCTTATTCCTCCTTCCTGACTGTTCTTCCTATATGCACAATGTATGGACCaatctctctttgtttctctgtcATGTACCTAACTATCTCTTTTTAAAGAAtgcgttctttctttctttccctccatctctttggttgttgttgtggtttagTGGTACAATAGTCTAGACCTGTGATTCTTCCATTGGTACTGTGGAGTGTTTCTGTATTTTGTTTtcatttttatattattttttaaatgcaatAATCTCCATGATGTAAAAAACAATCCAACCTAGGCTACTTCTTCCTAAATACAGCCTGCTCAGATCCAAAAACGCCTAATCATTGTTATGGGTTtaacatattatttagatacagtatatacaatgaGTTGTATGATAATGTACATTTTTATCATATTAGCATATTGGTTTTTTGTATACACATTTCAAGTAAATCCTCGTTGTTATTTCTCACTGTGTGTAAATAAATGTTGTTTATCTAAATATACAGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106964325 isoform X12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039992.1 True 2541 mRNA 0.43 2 46351995 46354652

Neighbor

gene id symbol gene type direction distance location
LOC110508109 LOC105029023 coding upstream 2428 46203597 ~ 46349567 (+)
foxo1a LOC106581554 coding upstream 560200 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 574016 45776962 ~ 45777979 (+)
mtus2b LOC106593344 coding upstream 687690 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 coding upstream 864286 45480328 ~ 45487737 (+)
nek3 nek3 coding downstream 20667 46375319 ~ 46411167 (+)
cysltr2b LOC106581558 coding downstream 218569 46573221 ~ 46576187 (+)
fndc3a LOC106581557 coding downstream 224968 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 388344 46742996 ~ 46745025 (+)
mlnr LOC106581570 coding downstream 419760 46774412 ~ 46783031 (+)
G2087576 NA non-coding upstream 14172 46337328 ~ 46337823 (+)
G2087570 NA non-coding upstream 27454 46324069 ~ 46324541 (+)
G2087567 NA non-coding upstream 32829 46318549 ~ 46319166 (+)
G2087552 NA non-coding upstream 54410 46297232 ~ 46297585 (+)
G2087580 NA non-coding downstream 3854 46358506 ~ 46359599 (+)
G2087594 NA non-coding downstream 80202 46434854 ~ 46435799 (+)
G2087624 NA non-coding downstream 88287 46442939 ~ 46454547 (+)
G2087626 NA non-coding downstream 91961 46446613 ~ 46447586 (+)
G2087569 NA other upstream 28301 46323084 ~ 46323694 (+)
G2087149 NA other upstream 553402 45797099 ~ 45798593 (+)
G2085969 NA other upstream 1941945 44408053 ~ 44410050 (+)
G2087592 LOC106592078 other downstream 139270 46493922 ~ 46499497 (+)
G2087865 NA other downstream 672467 47027119 ~ 47028563 (+)
prcp prcp other downstream 682390 47020501 ~ 47056921 (+)
G2088729 NA other downstream 1170788 47525440 ~ 47528548 (+)
G2088732 NA other downstream 1177770 47532422 ~ 47537945 (+)

Expression


Co-expression Network