cysltr2b (LOC106581558)


Basic Information

Item Value
gene id cysltr2b
gene name LOC106581558
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46573221 ~ 46576187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965783.1
ACAGAAAGTCAAGTGCATCTAGGGTTGATCCTGCAAACAACAGTCCTCAGCTCAGCCTACTCCACTCTGGAATGAAGTCTCGCTGTGGCAGTACACCCCTGGATCTGAGATGAACAGCTGCTGATCGTCAATACAGTGTTGACTGAAAAGTCAGGGTGCTTCTCATCATTAGTGTATCACAGAGCACTCTAAAGTGAAGAAATCAGTCATCATGGAAGATGGAAACTTGTCCTCTGACTGCTCCATCAGCATGTTCAAACACAGAGTCTACCCACCCGTATACCTAGTCATCTTCCTCCTCGGCCTCACCTTCAACCTCGTCTCCCTCTGCTTCTTCGTCAGTGTCTGGAGGAGTAAGAAAAAGTTTACTCCCGTCAACCTGTACATGGTCAACCTgctggtgtcagacttgatgctgGTGTGCTCCCTGCCACTCCGGGCCTTCTACTACTACATGGAATCTAGCTGGGTGTTTGGAGACATCGCCTGTCGCGTTATGTCCTACATCTTCTACATCAACATGTACGGGAGCATCTACTTCCTCACGGTGCTGAGTGTGGTTCGTTTTGTGGCAATCACCCAGCCGTACAGGTATATGAGCATGCAGAATAGCCGTAATTCCTGGCTGGTGTGTATATTGGTCTGGCTGCTGGTGTCGCTAGCCTCCATCCCTATGCTGACTTCAGGGACCGTCATAGATGCTTATGGTAGAACCAGGTGCTTGGAGCTTAATCCAGAATACAAGCTCATTCACATCCGCACACTGATCATAGCCAACCATGCCACCTTACTTCTGGGCTTCATCGTGCCCTTTGCAGTGATCTCTATCTGTTACATCTTTGTGGTGCGTAGCCTGCTGAAGCTGAGGAAGGTTGAAGGAAGGCCGAAATCCCAATACAAGAAGTCCATGTCCCTGGTTGTAATAGTCCTTAGCATCTTCCTAGTGTGTTTCCTGCCCTACCACGTCATGCGGACTGTCTTCCTGGAAGCTGAGATGCAGATGAGGGATAAAGGGTATGGAGATTCCTGTAGGTACATAGAGCGTGTACGTAAAGCAGCTGTTCTCACTTTGTGTCTGGCTGCGATGAACAGCTGCTTGGACCCACTTCTTTATTTCTTCGTTGGAGAGAACTTCAGGGTTTTCTGTCAGGGTGCTTACAAAGAGACGGAGGCAAAGTCACTGGctaagacagagggaaagaggaagggtCTGACATCAGGGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGAACACGTCTGACATCAGAGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGGACACATCCGACATCAGAGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGGACACATCCGACATCAGAGCTACAGGAACGAAACGCTCCAAACAGCTCCAGACCTGATAGTTAGCCTGGGACAGGTTGGAAGTGAAATATGACTATATTTGATGGCTTTGAGAAGAAACTCTAGAGATGGTTATTTTCTGCTGACAACCCTAGAAGACAATATACAGCTAGGTATATCAATACAAATGATGTGTCCCATTGTG
>XM_036965784.1
ACAGAAAGTCAAGTGCATCTAGGGTTGATCCTGCAAACAACAGTCCTCAGCTCAGCCTACTCCACTCTGGAATGAAGTCTCGCTGTGGCAGTACACCCCTGGATCTGAGATGAACAGCTGCTGATCGTCAATACAGTGTTGACTGAAAAGTCAGGGTGCTTCTCATCATTAGTGTATCACAGTAGGAGCACTCTAAAGTGAAGAAATCAGTCATCATGGAAGATGGAAACTTGTCCTCTGACTGCTCCATCAGCATGTTCAAACACAGAGTCTACCCACCCGTATACCTAGTCATCTTCCTCCTCGGCCTCACCTTCAACCTCGTCTCCCTCTGCTTCTTCGTCAGTGTCTGGAGGAGTAAGAAAAAGTTTACTCCCGTCAACCTGTACATGGTCAACCTgctggtgtcagacttgatgctgGTGTGCTCCCTGCCACTCCGGGCCTTCTACTACTACATGGAATCTAGCTGGGTGTTTGGAGACATCGCCTGTCGCGTTATGTCCTACATCTTCTACATCAACATGTACGGGAGCATCTACTTCCTCACGGTGCTGAGTGTGGTTCGTTTTGTGGCAATCACCCAGCCGTACAGGTATATGAGCATGCAGAATAGCCGTAATTCCTGGCTGGTGTGTATATTGGTCTGGCTGCTGGTGTCGCTAGCCTCCATCCCTATGCTGACTTCAGGGACCGTCATAGATGCTTATGGTAGAACCAGGTGCTTGGAGCTTAATCCAGAATACAAGCTCATTCACATCCGCACACTGATCATAGCCAACCATGCCACCTTACTTCTGGGCTTCATCGTGCCCTTTGCAGTGATCTCTATCTGTTACATCTTTGTGGTGCGTAGCCTGCTGAAGCTGAGGAAGGTTGAAGGAAGGCCGAAATCCCAATACAAGAAGTCCATGTCCCTGGTTGTAATAGTCCTTAGCATCTTCCTAGTGTGTTTCCTGCCCTACCACGTCATGCGGACTGTCTTCCTGGAAGCTGAGATGCAGATGAGGGATAAAGGGTATGGAGATTCCTGTAGGTACATAGAGCGTGTACGTAAAGCAGCTGTTCTCACTTTGTGTCTGGCTGCGATGAACAGCTGCTTGGACCCACTTCTTTATTTCTTCGTTGGAGAGAACTTCAGGGTTTTCTGTCAGGGTGCTTACAAAGAGACGGAGGCAAAGTCACTGGctaagacagagggaaagaggaagggtCTGACATCAGGGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGAACACGTCTGACATCAGAGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGGACACATCCGACATCAGAGCTACAGGAAGGAACACGTCCGACAACAGAGCTACAGGAAGGGACACATCCGACATCAGAGCTACAGGAACGAAACGCTCCAAACAGCTCCAGACCTGATAGTTAGCCTGGGACAGGTTGGAAGTGAAATATGACTATATTTGATGGCTTTGAGAAGAAACTCTAGAGATGGTTATTTTCTGCTGACAACCCTAGAAGACAATATACAGCTAGGTATATCAATACAAATGATGTGTCCCATTGTG

Function

NR:

description
cysteinyl leukotriene receptor 2-like

GO: NA

KEGG:

id description
K04323 CYSLTR2; cysteinyl leukotriene receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965783.1 False 1586 mRNA 0.49 2 46573221 46576187
XM_036965784.1 True 1590 mRNA 0.49 2 46573221 46576187

Neighbor

gene id symbol gene type direction distance location
nek3 nek3 coding upstream 162054 46375319 ~ 46411167 (+)
LOC118944693 NA coding upstream 218569 46351995 ~ 46354652 (+)
LOC110508109 LOC105029023 coding upstream 223654 46203597 ~ 46349567 (+)
foxo1a LOC106581554 coding upstream 781426 45703165 ~ 45791795 (+)
LOC118944695 NA coding upstream 795242 45776962 ~ 45777979 (+)
fndc3a LOC106581557 coding downstream 3433 46579620 ~ 46761993 (+)
LOC118944696 NA coding downstream 166809 46742996 ~ 46745025 (+)
mlnr LOC106581570 coding downstream 198225 46774412 ~ 46783031 (+)
zgc:153184 LOC106581572 coding downstream 245740 46821927 ~ 46897922 (+)
LOC110508118 cssa20h3orf52 coding downstream 330663 46906850 ~ 46930260 (+)
G2087664 NA non-coding upstream 27332 46545496 ~ 46545889 (+)
G2087659 NA non-coding upstream 37093 46535508 ~ 46536128 (+)
G2087654 NA non-coding upstream 47706 46510111 ~ 46525515 (+)
G2087656 NA non-coding upstream 47869 46511535 ~ 46525352 (+)
G2087655 NA non-coding upstream 56063 46516175 ~ 46517158 (+)
G2087704 NA non-coding downstream 60433 46636620 ~ 46637423 (+)
G2087756 NA non-coding downstream 132721 46708908 ~ 46709880 (+)
G2087799 NA non-coding downstream 240906 46817093 ~ 46820232 (+)
G2087812 NA non-coding downstream 265868 46842055 ~ 46848568 (+)
G2087592 LOC106592078 other upstream 76334 46493922 ~ 46499497 (+)
G2087569 NA other upstream 249527 46323084 ~ 46323694 (+)
G2087149 NA other upstream 774628 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1043282 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1085484 45480328 ~ 45487737 (+)
G2087865 NA other downstream 450932 47027119 ~ 47028563 (+)
prcp prcp other downstream 460855 47020501 ~ 47056921 (+)
G2088729 NA other downstream 949253 47525440 ~ 47528548 (+)
G2088732 NA other downstream 956235 47532422 ~ 47537945 (+)
G2088870 NA other downstream 1277919 47854106 ~ 47864829 (+)

Expression


Co-expression Network