zgc:153184 (LOC106581572)


Basic Information

Item Value
gene id zgc:153184
gene name LOC106581572
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46821927 ~ 46897922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965301.1
TTCAACTGTTGTGCGAGAAGAGTGGCACCAATGCAACTGCGCGCAAAACTGAAGCCTCcgccactccctctctctccttcgatCAACCTCGTCTCGTACACTGCCTGTGAAGATATGACAGTGTAGTTATCTGTAAACACAGACCTCCGCTGTTCAAGGAGTGTGCTCacatctctcattccctctccgcGTTAGTAGTGTAGGAGAGCTCTCCAGCCTCTGAAGTGGCTTCGCTCAAACGCAGCAGCGCGGTCATccgaggagacagagaagagggcAGGAAAAGGTGCATATCGCGAATTCCTCAAGGATGGAGGACTCACCGGTCAAGTCTTCGGTGGCCGAGTTGGCCGGGAGATTCAAAGATCACGTCATGCCGACGCCGACTCCGCACGACGAGAGGAAGCCTGTTAAAAGGAGGCCTCCTCCGGGCTCCCTGCAGCTTCACGACGTGAAACATGACCACGGGGAACTGGAGAAACCCAGCATCGTCTCTCCACACCCCCCCAAATTCAAGATGAAGACTTCCAAGAGTTCCCCCCTCATCGAGAAGCTGCAGgcaaACCTAACCTTGTCGCCCACCTCTCTGCTACCCTCGCCCAAGAGTCCCGAGGTGAAGCTGGCGCCGACGCCCATCTCCCCCGCAACCCATTGCTTCTTTCCCACAAGCCCCTGCAGCCCCACCCTGAGGCCCCAGCTGtccagtgaggaggaggagccgGTATGCTTTGAGAGCCCGGCGGAGGGGACCCCATTACTCAGCTTCAACAAGagTCGAGTTCGGCTGTCCTTCAAGAGGCGTCCGCCCACACGGCAGCACCGGCAGTCGTGTGTCGAGGAGGGCGTAGTCTCCGAGGGAGGGGTTGTGTCCCAAGGTAACCAAGACGTCCCCCAGGTGAACGGGGCCGAGGACCAGGTGGATCAGGTGTTTGAGCAGACAGGGGAGGGCGGGGAGAGGGGCGAGGAGACCCAGGGAAGCCCCCCGTCTCACCCAGACACTCTGACAGAGACTGGAGACAATGACAGGGACAGAGAACAGGCCAAAGAGGACAACGTtctggaggaggagacaggagaggcagCCCCAGCCACCCAGGATGGGAAGAAGGAAGCTGGGGAACAGGCGCTAGGTGAGCCCCAAGCTTCAGATTCTCTGGAggccatagaggaggaggaagggtctTGTAGCTCTTATGGAACAAAAGGAGACAACACGCAAACAGACGAACAGGAGGATTCAGCTCAGCCTCGTGAGAGGGATGAAAACCTCTGAACAATGTTCATAAATCACTGTTGAAGAAATCATACAATCAGTCATTGCGTGAGTCCCACGTGGCACCCTACAGCTtaatagtgctctacttttgaccagagacctggttaaaagtagtgcactatataaggaataggggtgtcatttgggatgcatcctcacTAATTATGAAACTAGCTTGTCTTCTAAGAACCCTCGTTGGACATTCTGTATCCTGCATAATCTTGGTTCCCAGAACTAAATCTGTCCTTGCTTCTTCACCTGTCACATTGAATTGTGTCTGTAGAGCAGTGTATGTAGACAATCCTCTGCATAGCTTTGTGTTCTATCAGATACTGTTGGAGGTGATACTTTCTTGTTTCTGCAGCAGTTTAAAGTAATAATTATCTTTATAGTATTTGGCCCAGGTGTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTTACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGgtcacctctcacctctcctgGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGttacctctcatctctcctggttacctctcacctctcctggttacctctcatctctcctggtcacctctcatctctcctggtCACCTGTCACCTCTCCCGGTCACCTGTCACCTCTCCTGGTCACCTCTCAACTCTCCTGGTCACCTGTCACCTCTCCTGGTCACCTCTCCTGatcacctctcacctctcctgGTCACCTCTCCTGGTCACTTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTGTCATCTCTCCTGGTCACCTGTCATCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTGTCACCTCTCCTGGTCACCTCTGCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCATCTCTCTCACCGGAGGACCAGGCAGCTTGTCAAGCTCTATGACACTAGAGCAGAGTGTGAATTATTGATAATATTGATCCTTTGACTGAGACTCTCTCCCGACAGCGAGACACATCAACCTCAGTGGAGACAGTCACCTATCTCTCTGAGGCTGCTGTCGGAGGAAAAAGAGTAGGACATTTATTCGAAGGACAACTATGAAACatcatttaatttgattttattttttattgttcacCTTTTTGGGGAAGCATGGCTTCATTTGGCTTCCATTAATacacagatgtctctttccatgtGCGCAGCCTGCAGGTAGCCTACTCTTttaaagtgatttgtttgacaatcagatagTTGTGTTCATGccatattaaaatgtcatactttttttctttctttctttcttttttttttacctttacatGACATTAGAGCGTTTCCTGGTTTCCACAGAAACAGCTGTTGTCTTTACATGGCAATGATCATACAGACCAGCCGCAAGTCAATACGCAACACTCTGGTTGgaagaaaaataaacattttaaagaaAAGTaagtaagaaagaaagagagaaagaaagaaagaaagaga
>XM_036965300.1
TCAACTGTTGTGCGAGAAGAGTGGCACCAATGCAACTGCGCGCAAAACTGAAGCCTCcgccactccctctctctccttcgatCAACCTCGTCTCGTACACTGCCTGTGAAGATATGACAGTGTAGTTATCTGTAAACACAGACCTCCGCTGTTCAAGGAGTGTGCTCacatctctcattccctctccgcGTTAGTAGTGTAGGAGAGCTCTCCAGCCTCTGAAGTGGCTTCGCTCAAACGCAGCAGCGCGGTCATccgaggagacagagaagagggcAGGAAAAGGTGCATATCGCGAATTCCTCAAGGATGGAGCAGGACTCACCGGTCAAGTCTTCGGTGGCCGAGTTGGCCGGGAGATTCAAAGATCACGTCATGCCGACGCCGACTCCGCACGACGAGAGGAAGCCTGTTAAAAGGAGGCCTCCTCCGGGCTCCCTGCAGCTTCACGACGTGAAACATGACCACGGGGAACTGGAGAAACCCAGCATCGTCTCTCCACACCCCCCCAAATTCAAGATGAAGACTTCCAAGAGTTCCCCCCTCATCGAGAAGCTGCAGgcaaACCTAACCTTGTCGCCCACCTCTCTGCTACCCTCGCCCAAGAGTCCCGAGGTGAAGCTGGCGCCGACGCCCATCTCCCCCGCAACCCATTGCTTCTTTCCCACAAGCCCCTGCAGCCCCACCCTGAGGCCCCAGCTGtccagtgaggaggaggagccgGTATGCTTTGAGAGCCCGGCGGAGGGGACCCCATTACTCAGCTTCAACAAGagTCGAGTTCGGCTGTCCTTCAAGAGGCGTCCGCCCACACGGCAGCACCGGCAGTCGTGTGTCGAGGAGGGCGTAGTCTCCGAGGGAGGGGTTGTGTCCCAAGGTAACCAAGACGTCCCCCAGGTGAACGGGGCCGAGGACCAGGTGGATCAGGTGTTTGAGCAGACAGGGGAGGGCGGGGAGAGGGGCGAGGAGACCCAGGGAAGCCCCCCGTCTCACCCAGACACTCTGACAGAGACTGGAGACAATGACAGGGACAGAGAACAGGCCAAAGAGGACAACGTtctggaggaggagacaggagaggcagCCCCAGCCACCCAGGATGGGAAGAAGGAAGCTGGGGAACAGGCGCTAGGTGAGCCCCAAGCTTCAGATTCTCTGGAggccatagaggaggaggaagggtctTGTAGCTCTTATGGAACAAAAGGAGACAACACGCAAACAGACGAACAGGAGGATTCAGCTCAGCCTCGTGAGAGGGATGAAAACCTCTGAACAATGTTCATAAATCACTGTTGAAGAAATCATACAATCAGTCATTGCGTGAGTCCCACGTGGCACCCTACAGCTtaatagtgctctacttttgaccagagacctggttaaaagtagtgcactatataaggaataggggtgtcatttgggatgcatcctcacTAATTATGAAACTAGCTTGTCTTCTAAGAACCCTCGTTGGACATTCTGTATCCTGCATAATCTTGGTTCCCAGAACTAAATCTGTCCTTGCTTCTTCACCTGTCACATTGAATTGTGTCTGTAGAGCAGTGTATGTAGACAATCCTCTGCATAGCTTTGTGTTCTATCAGATACTGTTGGAGGTGATACTTTCTTGTTTCTGCAGCAGTTTAAAGTAATAATTATCTTTATAGTATTTGGCCCAGGTGTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTTACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGgtcacctctcacctctcctgGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGTTACCTGTCACCTCTCCTGGTTACCTCTCACCTCTCCTGGttacctctcatctctcctggttacctctcacctctcctggttacctctcatctctcctggtcacctctcatctctcctggtCACCTGTCACCTCTCCCGGTCACCTGTCACCTCTCCTGGTCACCTCTCAACTCTCCTGGTCACCTGTCACCTCTCCTGGTCACCTCTCCTGatcacctctcacctctcctgGTCACCTCTCCTGGTCACTTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTGTCATCTCTCCTGGTCACCTGTCATCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTGTCACCTCTCCTGGTCACCTCTGCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCACCTCTCCTGGTCATCTCTCTCACCGGAGGACCAGGCAGCTTGTCAAGCTCTATGACACTAGAGCAGAGTGTGAATTATTGATAATATTGATCCTTTGACTGAGACTCTCTCCCGACAGCGAGACACATCAACCTCAGTGGAGACAGTCACCTATCTCTCTGAGGCTGCTGTCGGAGGAAAAAGAGTAGGACATTTATTCGAAGGACAACTATGAAACatcatttaatttgattttattttttattgttcacCTTTTTGGGGAAGCATGGCTTCATTTGGCTTCCATTAATacacagatgtctctttccatgtGCGCAGCCTGCAGGTAGCCTACTCTTttaaagtgatttgtttgacaatcagatagTTGTGTTCATGccatattaaaatgtcatactttttttctttctttctttcttttttttttacctttacatGACATTAGAGCGTTTCCTGGTTTCCACAGAAACAGCTGTTGTCTTTACATGGCAATGATCATACAGACCAGCCGCAAGTCAATACGCAACACTCTGGTTGgaagaaaaataaacattttaaagaaAAGTaagtaagaaagaaagagagaaagaaagaaagaaagaga

Function

NR:

description
capZ-interacting protein

GO: NA

KEGG:

id description
K18615 RCSD1, CAPZIP; CapZ-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965301.1 False 3094 mRNA 0.52 6 46821927 46897922
XM_036965300.1 True 3096 mRNA 0.52 6 46821928 46897922

Neighbor

gene id symbol gene type direction distance location
mlnr LOC106581570 coding upstream 38896 46774412 ~ 46783031 (+)
fndc3a LOC106581557 coding upstream 63610 46579620 ~ 46761993 (+)
LOC118944696 NA coding upstream 76902 46742996 ~ 46745025 (+)
cysltr2b LOC106581558 coding upstream 245740 46573221 ~ 46576187 (+)
nek3 nek3 coding upstream 410760 46375319 ~ 46411167 (+)
LOC110508118 cssa20h3orf52 coding downstream 8928 46906850 ~ 46930260 (+)
guca1c LOC106581568 coding downstream 48948 46946870 ~ 46959779 (+)
LOC110508116 thrsp coding downstream 73365 46971287 ~ 46972031 (+)
rab30 rab30 coding downstream 80181 46978103 ~ 47003404 (+)
prcp prcp coding downstream 122579 47020501 ~ 47056921 (+)
G2087799 NA non-coding upstream 1695 46817093 ~ 46820232 (+)
G2087756 NA non-coding upstream 112047 46708908 ~ 46709880 (+)
G2087704 NA non-coding upstream 184504 46636620 ~ 46637423 (+)
G2087664 NA non-coding upstream 276038 46545496 ~ 46545889 (+)
G2087829 NA non-coding downstream 2681 46900603 ~ 46903258 (+)
G2087833 NA non-coding downstream 17445 46915367 ~ 46915941 (+)
G2087836 NA non-coding downstream 19975 46917897 ~ 46918268 (+)
G2087727 NA non-coding downstream 38891 46936813 ~ 46937184 (+)
G2087838 NA non-coding downstream 45060 46942982 ~ 46943760 (+)
G2087592 LOC106592078 other upstream 325040 46493922 ~ 46499497 (+)
G2087569 NA other upstream 498233 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1023334 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1291988 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1334190 45480328 ~ 45487737 (+)
G2087865 NA other downstream 129197 47027119 ~ 47028563 (+)
G2088729 NA other downstream 627518 47525440 ~ 47528548 (+)
G2088732 NA other downstream 634500 47532422 ~ 47537945 (+)
G2088870 NA other downstream 956184 47854106 ~ 47864829 (+)

Expression


Co-expression Network