guca1c (LOC106581568)


Basic Information

Item Value
gene id guca1c
gene name LOC106581568
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46946870 ~ 46959779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965306.1
CAATGCAGCAAGAGTCAGCCAGTTGCAGTGTTGTTCTCCACTACGCCTCACCTccctccggctcctctctctgcagGCAGGCCCCAGACCCCAAGGCCCACACCACACCTCTCTCCTAGGCAGAAGCAGAACGTGTCTGTAGGAGTAAGAAAGTATGGGCGCCTACGAGTCTAACCTGGACGATATCCTGGCAGAGGACATGCACCACTGGTACAACAAGTTTATGAAAGAGTCTCCTTCGGGACTCATCACGTTGTTTGAGCTGAAGACGATGCTGGAGATGCAGGGGATGACAGAAGAAGCTAGCAGCTACGTGGACCAGGTCTTCTTTACCTTCGACATGGACGGGgatGGATACATAGACTTCGTAGAGTACATAGCAGCAGTCAGTCTGATGCTGAAAGGAGAAATCAACCAGAAACTGAAATGGTACTTCAAACTGTTCGATCAGGACGGAAACGGCAAGATTGACCAAGATGAAATGGGGACAATATTCAAGGCAATCCAGGACATCACCAGATGTTATGACCCTCCTACGGAGGAGATTGTGACCCTCATCTATGAGAAGGTTGACATAAATAACGAAGGTGAGTTGACTCTGGAGGAGTTTATCGAAGGAGCCAGGGACCACCAAGACATCATGGAGATGCTGGGAAAGATGATGGACCTCACCAACGTTCTGAAGATCATTGTCAACGGACAGAAAAAGCAGGTCAAATCACCCGAATGAGGATGACGTCACTTCCTGTTGCACTTCCTGTTTTGTGGAGAAAGAATAGGATTGTTTTGGGGACGGAAAGCAATTATAGTGGAAtgtttaatatataatatatggaGGAAATGTATAAAAGAACAAACGACGAACTTGAGCATCTTGATGAGAAGGTGAATATAcatgaatgggaggggagccatGTCCCAAATCTCCATCGACCAAGAAGACTGAGTTGATGTAAGGACAATGGAACCATGCCAGGAGGCCATGTGACCTACTCTATGTTCTCTATTTCTACATCCCGATTGTCTTTTTCACCCTTTTCCCAAAGTCCCATCATAGATTTAACCACGCTGGAAACCCTCTAGGCAATGATTACACCAATTAAATACTTTGAGATCAAATGACAGGAAGTGTGGAAGTGCAAGTGTAGAGAATTGGGATGCAGACTatatgttctctctgtgtgtatcacttgagtatcctcctcctctcactgtcACCACAGCTCTTCTCTAgtcctcctgctcctgctcctagtctcacagtcaccacagctctctctggtcctcctcctgctctcacagtcaccacagctctctctaatcctcctcctgctctcaaagtcaccacagctctctctaatcctcctcctgctctcacaGTCACCACAGCTCTCTCTAGTTCTCCTCATCTCAGTCACCACAGCTCTCTCTagtcctcctcctgctctcacaGTCACCACAGCTTTCTCTAgtactcctcctctcacagtcACCACAGCTCTCTCTAGTCCTCCTCATCTCAGTCACCACAGCTCTCTCTagtcctcctcctgctctcacagtcaccacagctctctctagtcctcctcctgctctcacaGTCACCACAGCTTTCTCTAgtactcctcctctcacagtcaccacagctctctctagtcctcctcctgctcccacagtcaccacagctctctctagtcctcctcctgatcctcctctctcagtcaccacagctctctctagtcctcctcctcctgctcctcctctaaCAGTCACCACAGCTCTATCTagtcctcctcctgctctcacagtcaccacagctctctctagtcctcctcctgctctcacagtcaccacagctttctctagtcctcctcctcctcacagtcaCCACAGCTCTCTCTAGTCCTCATCCTGCTCTCACAGTCACCACAGCTCTCTCTAGTCCTCATCCTGCTCTCACAGTCACCACAGCACTCTCTAGTCCTCCTCATCTCAGTCACCACAGCACTCTCTAGTCCTCCTCATCTCAGTCACCACAGCTCTATCtagtcctgctcctcctctcacagtcaccacagctctctttagtcctcctcctgctcccacagtcaccacagctctCTCTAGTCCTCCTCATCTCAGTCACCACAGCTCTCTctagtcctcctcctcctcacagtcaCCACAGCTCTCTTTAGTCCTCCTACTGctcccacagtcaccacagcttTCTCTAGTACTCCCCCTCTCACAGTCACCACAGCTTTCTCTAGTACTCCCCCTCTCACAGTCACCACAGCTCTCTCTAGTCATCCTCCTGCTCTCACAGTCACCACAGCTCTCTCTagtcctcctcctgctctcacagtcaccacagctctctctagtcctcctcctgctctcacagtcaccacagc

Function

NR:

description
guanylyl cyclase-activating protein 1-like

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965306.1 True 2417 mRNA 0.50 4 46946870 46959779

Neighbor

gene id symbol gene type direction distance location
LOC110508118 cssa20h3orf52 coding upstream 16610 46906850 ~ 46930260 (+)
zgc:153184 LOC106581572 coding upstream 48948 46821927 ~ 46897922 (+)
mlnr LOC106581570 coding upstream 163839 46774412 ~ 46783031 (+)
fndc3a LOC106581557 coding upstream 188553 46579620 ~ 46761993 (+)
LOC118944696 NA coding upstream 201845 46742996 ~ 46745025 (+)
LOC110508116 thrsp coding downstream 11508 46971287 ~ 46972031 (+)
rab30 rab30 coding downstream 18324 46978103 ~ 47003404 (+)
prcp prcp coding downstream 60722 47020501 ~ 47056921 (+)
LOC110513068 fam181b coding downstream 114751 47074530 ~ 47076721 (+)
LOC118944690 NA coding downstream 522611 47482390 ~ 47483034 (+)
G2087838 NA non-coding upstream 3110 46942982 ~ 46943760 (+)
G2087727 NA non-coding upstream 9686 46936813 ~ 46937184 (+)
G2087836 NA non-coding upstream 28602 46917897 ~ 46918268 (+)
G2087833 NA non-coding upstream 30929 46915367 ~ 46915941 (+)
G2087829 NA non-coding upstream 43612 46900603 ~ 46903258 (+)
G2087731 NA non-coding downstream 75811 47035590 ~ 47035929 (+)
G2087869 NA non-coding downstream 80333 47040112 ~ 47040808 (+)
G2087881 NA non-coding downstream 104581 47064360 ~ 47064591 (+)
G2088382 NA non-coding downstream 117964 47077743 ~ 47078349 (+)
G2087592 LOC106592078 other upstream 449983 46493922 ~ 46499497 (+)
G2087569 NA other upstream 623176 46323084 ~ 46323694 (+)
G2087149 NA other upstream 1148277 45797099 ~ 45798593 (+)
mtus2b LOC106593344 other upstream 1416931 45493223 ~ 45664305 (+)
LOC110508103 LOC106581548 other upstream 1459133 45480328 ~ 45487737 (+)
G2087865 NA other downstream 67340 47027119 ~ 47028563 (+)
G2088729 NA other downstream 565661 47525440 ~ 47528548 (+)
G2088732 NA other downstream 572643 47532422 ~ 47537945 (+)
G2088870 NA other downstream 894327 47854106 ~ 47864829 (+)

Expression


Co-expression Network