Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944690 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 47482390 ~ 47483034 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: splicing factor 3A subunit 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036965048.1 | True | 645 | mRNA | 0.70 | 1 | 47482390 | 47483034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513068 | fam181b | coding | upstream | 405669 | 47074530 ~ 47076721 (+) |
| prcp | prcp | coding | upstream | 425469 | 47020501 ~ 47056921 (+) |
| rab30 | rab30 | coding | upstream | 478986 | 46978103 ~ 47003404 (+) |
| LOC110508116 | thrsp | coding | upstream | 510359 | 46971287 ~ 46972031 (+) |
| guca1c | LOC106581568 | coding | upstream | 522611 | 46946870 ~ 46959779 (+) |
| tenm4 | tenm4 | coding | downstream | 157563 | 47640597 ~ 48319085 (+) |
| nars2 | nars2 | coding | downstream | 918219 | 48401253 ~ 48458439 (+) |
| gab2 | gab2 | coding | downstream | 977415 | 48460449 ~ 48624448 (+) |
| zmp:0000001236 | LOC106581583 | coding | downstream | 1150338 | 48633372 ~ 48774681 (+) |
| trpc6b | LOC106581586 | coding | downstream | 1606849 | 49089883 ~ 49186113 (+) |
| G2088709 | NA | non-coding | upstream | 7600 | 47474424 ~ 47474790 (+) |
| G2088707 | NA | non-coding | upstream | 19944 | 47462015 ~ 47462446 (+) |
| G2088703 | NA | non-coding | upstream | 24880 | 47457178 ~ 47457510 (+) |
| G2088697 | NA | non-coding | upstream | 33755 | 47448306 ~ 47448635 (+) |
| G2088690 | NA | non-coding | upstream | 40080 | 47441800 ~ 47442310 (+) |
| G2088713 | NA | non-coding | downstream | 3780 | 47486814 ~ 47487849 (+) |
| G2088745 | NA | non-coding | downstream | 98348 | 47581382 ~ 47635302 (+) |
| G2088752 | NA | non-coding | downstream | 106890 | 47589924 ~ 47590226 (+) |
| G2088753 | NA | non-coding | downstream | 110732 | 47593766 ~ 47658865 (+) |
| G2088761 | NA | non-coding | downstream | 123500 | 47606534 ~ 47607094 (+) |
| G2087865 | NA | other | upstream | 453827 | 47027119 ~ 47028563 (+) |
| G2087592 | LOC106592078 | other | upstream | 985503 | 46493922 ~ 46499497 (+) |
| G2087569 | NA | other | upstream | 1158696 | 46323084 ~ 46323694 (+) |
| G2087149 | NA | other | upstream | 1683797 | 45797099 ~ 45798593 (+) |
| G2088729 | NA | other | downstream | 42406 | 47525440 ~ 47528548 (+) |
| G2088732 | NA | other | downstream | 49388 | 47532422 ~ 47537945 (+) |
| G2088870 | NA | other | downstream | 371072 | 47854106 ~ 47864829 (+) |
| G2089020 | NA | other | downstream | 705175 | 48188209 ~ 48191362 (+) |
| G2089124 | NA | other | downstream | 949444 | 48432478 ~ 48455486 (+) |
