G2084294 (LOC106600457)


Basic Information

Item Value
gene id G2084294
gene name LOC106600457
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42382680 ~ 42382932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383388
tgttgttcccactgtgacaattaaaacctacccaaaccagaaaccgtggatagatggcagcattcgcgcaaaactgaaagcacaagcCACCGCGTTTAACtacggcaaggtgactgggaatatggtcgaaaacaaacagtgtagttattccctccgtcaGGCAATccaacaggcaaaatgtcagtacagagacaaagtggagtcgcaattcaacagttTTGATAGAGACGTATATGGCAGGGACTCCAAACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383388 True 253 lncRNA 0.45 1 42382680 42382932

Neighbor

gene id symbol gene type direction distance location
LOC110507284 sucnr1 coding upstream 140678 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 600844 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 810758 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 876069 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 1178985 41194800 ~ 41203695 (+)
LOC110507235 LOC106581497 coding downstream 15757 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 101924 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 108528 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 119610 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 127887 42510819 ~ 42515563 (+)
G2084285 NA non-coding upstream 5898 42375833 ~ 42376782 (+)
G2084274 NA non-coding upstream 19866 42362606 ~ 42362814 (+)
G2084265 NA non-coding upstream 25948 42356511 ~ 42356732 (+)
G2084264 NA non-coding upstream 26965 42355490 ~ 42355715 (+)
G2084256 NA non-coding upstream 41790 42340676 ~ 42340890 (+)
G2084334 NA non-coding downstream 38506 42421438 ~ 42421675 (+)
G2084340 NA non-coding downstream 42211 42425143 ~ 42425343 (+)
G2084353 NA non-coding downstream 51388 42434320 ~ 42434558 (+)
G2084357 NA non-coding downstream 68491 42451423 ~ 42453488 (+)
G2084362 NA non-coding downstream 76258 42459190 ~ 42459407 (+)
G2084156 NA other upstream 121043 42260523 ~ 42261637 (+)
G2083851 NA other upstream 270644 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1169908 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1397826 40981370 ~ 40984854 (+)
G2084659 NA other downstream 680356 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1149338 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1349463 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1735291 44118223 ~ 44119239 (+)
G2085969 NA other downstream 2025121 44408053 ~ 44410050 (+)

Expression


Co-expression Network