G2084334


Basic Information

Item Value
gene id G2084334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42421438 ~ 42421675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383430
TAAGACCTCAGCATTTCCTGTATTGTCCGCTCTCAACGAATCACCTACGGATGGTTGGTTCGTTGACCAGCTCCATTATTGCTGCAAGTTATAAGTGAATCCAAGATGGCGCTGCAGTAGGACatgtgtttctgtctttgtcttatccTGTGTTTTATCCCGTGTAAATAGCCAGTCAGTTCGCTGATGAAACTGActtgatcagcctgttgcatgatgaTGAGGAACATCATGGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383430 True 238 lncRNA 0.45 1 42421438 42421675

Neighbor

gene id symbol gene type direction distance location
LOC110507235 LOC106581497 coding upstream 5302 42398689 ~ 42416136 (+)
LOC110507284 sucnr1 coding upstream 179436 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 639602 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 849516 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 914827 41485189 ~ 41507173 (+)
LOC110508060 LOC106581495 coding downstream 63181 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 69785 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 80867 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 89144 42510819 ~ 42515563 (+)
LOC110508057 LOC106581503 coding downstream 152907 42574582 ~ 42629238 (+)
G2084294 LOC106600457 non-coding upstream 38506 42382680 ~ 42382932 (+)
G2084285 NA non-coding upstream 44656 42375833 ~ 42376782 (+)
G2084274 NA non-coding upstream 58624 42362606 ~ 42362814 (+)
G2084265 NA non-coding upstream 64706 42356511 ~ 42356732 (+)
G2084264 NA non-coding upstream 65723 42355490 ~ 42355715 (+)
G2084340 NA non-coding downstream 3468 42425143 ~ 42425343 (+)
G2084353 NA non-coding downstream 12645 42434320 ~ 42434558 (+)
G2084357 NA non-coding downstream 29748 42451423 ~ 42453488 (+)
G2084362 NA non-coding downstream 37515 42459190 ~ 42459407 (+)
G2084156 NA other upstream 159801 42260523 ~ 42261637 (+)
G2083851 NA other upstream 309402 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1208666 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1436584 40981370 ~ 40984854 (+)
G2084659 NA other downstream 641613 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1110595 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1310720 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1696548 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1986378 44408053 ~ 44410050 (+)

Expression


Co-expression Network