G2084394


Basic Information

Item Value
gene id G2084394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42488803 ~ 42489028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383495
GTCGGTGGGGTAAGTACATAAAGAAAACAAAGCCATATTTTGGACTCTCACGATCACTTTTTGAAGTGAATTGAATTGGCTATTTCTTAATACAAATGAAGTATATTTCAAAATATTGTGTACTGCCTCTAAAACATTTTACTGTAGATTcgtggtagtcttaaacaaatccactttgaaacaaaagtctacacctcacacacatgagGCTTAAagaaaagaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383495 True 226 lncRNA 0.34 1 42488803 42489028

Neighbor

gene id symbol gene type direction distance location
LOC110507235 LOC106581497 coding upstream 72667 42398689 ~ 42416136 (+)
LOC110507284 sucnr1 coding upstream 246801 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 706967 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 916881 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 982192 41485189 ~ 41507173 (+)
LOC110508061 LOC106581496 coding downstream 2432 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 13514 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 21791 42510819 ~ 42515563 (+)
LOC110508057 LOC106581503 coding downstream 85554 42574582 ~ 42629238 (+)
cux1b LOC106581515 coding downstream 177629 42666657 ~ 42816758 (+)
LOC110508060 LOC106581495 non-coding upstream 1102 42484856 ~ 42492905 (+)
G2084362 NA non-coding upstream 29396 42459190 ~ 42459407 (+)
G2084357 NA non-coding upstream 35315 42451423 ~ 42453488 (+)
G2084353 NA non-coding upstream 54245 42434320 ~ 42434558 (+)
G2084340 NA non-coding upstream 63460 42425143 ~ 42425343 (+)
G2084397 NA non-coding downstream 6960 42495988 ~ 42497663 (+)
G2084398 NA non-coding downstream 10283 42499311 ~ 42500446 (+)
G2084400 NA non-coding downstream 12587 42501615 ~ 42501828 (+)
G2084401 NA non-coding downstream 13161 42502189 ~ 42502444 (+)
G2084407 LOC106581489 non-coding downstream 30617 42519645 ~ 42519875 (+)
G2084156 NA other upstream 227166 42260523 ~ 42261637 (+)
G2083851 NA other upstream 376767 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1276031 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1503949 40981370 ~ 40984854 (+)
G2084659 NA other downstream 574260 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1043242 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1243367 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1629195 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1919025 44408053 ~ 44410050 (+)

Expression


Co-expression Network