G2084398


Basic Information

Item Value
gene id G2084398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42499311 ~ 42500446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383499
aagtctatatacaatgtgagcaaatgaggtgagaagggaggtaaaggcaaaaaaggccttggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgcagaggagcaaaataaataaattaattaaatacagttgggaaagaggtagttgatagggctaaattataggtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgagggagataagtgtttcgagtttcagagatttttgtagttcgttccagtcattggcagcagagaactggaaagagaggcggccaaagaaagaattggttttgggggtgactagagagatatacctgctggagcgtgtgctacaggtgggagattctatggtgaccagcgagctgagataaggggggactttacctagcagggtcttgtagatgacatggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggtcgcaatggtgggtagtatatggggctttggtgacaaaacggattgcactgtgatagactgcatccaatttgttgagtagggtattggaggctattttgtaaattacatcgccaaagtcgaggattggtaggatggtcagttttataagggtatgtttggcagcatgagtgaaggatgctttgttgcgaaataggaagccaattctagatttaactttgaattggagatgtttgatatgggtctggaaggagagtttacagtctaaccagacacctaagtatttgtagttgtccacgtattctaagtcagagccgtccagagtagtgatgttggacaggcgggtaggtgcaggtagcgatcggttgaagagcatgcatttagttttacttgtatttaagagcaattgaaggccacggaaggagagttgtatggcattgaagcttgcctggagggttgttaacacagtgtccaaagaaaggccggaagtatacagaatggtgtcgtctgcgtagaggtgggtcagagactcaccagcagcaagagcgacctcattgatgtatacagagaagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383499 True 1136 lncRNA 0.44 1 42499311 42500446

Neighbor

gene id symbol gene type direction distance location
LOC110508060 LOC106581495 coding upstream 6406 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding upstream 6880 42491460 ~ 42492431 (+)
LOC110507235 LOC106581497 coding upstream 83175 42398689 ~ 42416136 (+)
LOC110507284 sucnr1 coding upstream 257309 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 717475 41778921 ~ 41781836 (+)
LOC110507283 LOC106581492 coding downstream 2096 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 10373 42510819 ~ 42515563 (+)
LOC110508057 LOC106581503 coding downstream 74136 42574582 ~ 42629238 (+)
cux1b LOC106581515 coding downstream 166211 42666657 ~ 42816758 (+)
LOC110508074 sh2b2 coding downstream 336799 42837245 ~ 42871486 (+)
G2084397 NA non-coding upstream 1648 42495988 ~ 42497663 (+)
G2084394 NA non-coding upstream 10283 42488803 ~ 42489028 (+)
G2084362 NA non-coding upstream 39904 42459190 ~ 42459407 (+)
G2084357 NA non-coding upstream 45823 42451423 ~ 42453488 (+)
G2084400 NA non-coding downstream 1169 42501615 ~ 42501828 (+)
G2084401 NA non-coding downstream 1743 42502189 ~ 42502444 (+)
G2084407 LOC106581489 non-coding downstream 19199 42519645 ~ 42519875 (+)
G2084412 NA non-coding downstream 56663 42557109 ~ 42557308 (+)
G2084455 NA non-coding downstream 92420 42592866 ~ 42594069 (+)
G2084156 NA other upstream 237674 42260523 ~ 42261637 (+)
G2083851 NA other upstream 387275 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 992138 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1286539 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1514457 40981370 ~ 40984854 (+)
G2084659 NA other downstream 562842 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1031824 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1231949 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1617777 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1907607 44408053 ~ 44410050 (+)

Expression


Co-expression Network