Gene
RNA
| Item | Value |
|---|---|
| gene id | G2084400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 42501615 ~ 42501828 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2383501 | True | 214 | lncRNA | 0.46 | 1 | 42501615 | 42501828 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508060 | LOC106581495 | coding | upstream | 8710 | 42484856 ~ 42492905 (+) |
| LOC110508061 | LOC106581496 | coding | upstream | 9184 | 42491460 ~ 42492431 (+) |
| LOC110507235 | LOC106581497 | coding | upstream | 85479 | 42398689 ~ 42416136 (+) |
| LOC110507284 | sucnr1 | coding | upstream | 259613 | 42231358 ~ 42242002 (+) |
| LOC118944685 | NA | coding | upstream | 719779 | 41778921 ~ 41781836 (+) |
| LOC110507283 | LOC106581492 | coding | downstream | 714 | 42502542 ~ 42503473 (+) |
| LOC110508059 | LOC106581491 | coding | downstream | 8991 | 42510819 ~ 42515563 (+) |
| LOC110508057 | LOC106581503 | coding | downstream | 72754 | 42574582 ~ 42629238 (+) |
| cux1b | LOC106581515 | coding | downstream | 164829 | 42666657 ~ 42816758 (+) |
| LOC110508074 | sh2b2 | coding | downstream | 335417 | 42837245 ~ 42871486 (+) |
| G2084398 | NA | non-coding | upstream | 1169 | 42499311 ~ 42500446 (+) |
| G2084397 | NA | non-coding | upstream | 3952 | 42495988 ~ 42497663 (+) |
| G2084394 | NA | non-coding | upstream | 12587 | 42488803 ~ 42489028 (+) |
| G2084362 | NA | non-coding | upstream | 42208 | 42459190 ~ 42459407 (+) |
| G2084401 | NA | non-coding | downstream | 361 | 42502189 ~ 42502444 (+) |
| G2084407 | LOC106581489 | non-coding | downstream | 17817 | 42519645 ~ 42519875 (+) |
| G2084412 | NA | non-coding | downstream | 55281 | 42557109 ~ 42557308 (+) |
| G2084455 | NA | non-coding | downstream | 91038 | 42592866 ~ 42594069 (+) |
| G2084448 | NA | non-coding | downstream | 99187 | 42601015 ~ 42602836 (+) |
| G2084156 | NA | other | upstream | 239978 | 42260523 ~ 42261637 (+) |
| G2083851 | NA | other | upstream | 389579 | 41971259 ~ 42112036 (+) |
| LOC110507232 | LOC106593204 | other | upstream | 994442 | 41485189 ~ 41507173 (+) |
| G2083239 | NA | other | upstream | 1288843 | 41212204 ~ 41212772 (+) |
| G2083005 | NA | other | upstream | 1516761 | 40981370 ~ 40984854 (+) |
| G2084659 | NA | other | downstream | 561460 | 43063288 ~ 43064257 (+) |
| G2085037 | NA | other | downstream | 1030442 | 43532270 ~ 43532578 (+) |
| G2085122 | NA | other | downstream | 1230567 | 43732395 ~ 43733894 (+) |
| G2085314 | NA | other | downstream | 1616395 | 44118223 ~ 44119239 (+) |
| G2085969 | NA | other | downstream | 1906225 | 44408053 ~ 44410050 (+) |
