G2084608


Basic Information

Item Value
gene id G2084608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42887479 ~ 42888954 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383760
aagtggtactcgTTTAGCAAGCAGCGTGACGTCCTGTACAATCTGTCATGAGACATAGAGCAGATTGAAGTTCAAGTTGAGTAAAAACAACTACAGGTTGATTAGAGCTGAGGTGTCTCGATCCCTTCCTGTGTCTGCTGGTGGTCATTTCCTGTTTGTCTTCGTGAAGATCTCGCTTTAAGAACATGAAGGGCAAGTCTGCAAAGAAGGGAAAAGACTGGATcctggaggggaggagaagacagGGCAGGTATGTACCCCTCTGACTACACTGTCTCATTGAGAAGACAGGGCAGGTATGTACCCCTCTGTCTACACTGTCTCATTGAGAAGACAGGGCAGGTATGTACCCCTCTGTCTACACTGTCTCATTGGGTGGTGATCCTGTACAGTTCAACATTAGTACCATCAACTTATTACATTCATATAGCTTACAACCCCATTTGGATGAAGCCAGTAGGCTCTGTAACAGAAAGACTGGTCTCTTACTGTCTGTGGTGTGTTCTGTCTCTCAGGGAGGTCCGAGCTGACACAGCGTATACTGCCCGGCAGAGAAGGACTCACTTCTGAACCCGTCAGTCCTGTGTGTTCCGGGCCTGGAGATTCACCCTTATGGAATACTACTGTCCTGTGGACAGAATCTGGACAGAAACTGGCCCATCTTTAGGACATGGTCCCAATCCTCTGGACAGAAACTGTCCCCTCTCTAGGACATGGTCCCAATCCTCTGGACAGAAACTGGCCCCTCTCTAGGACATGGTCCTATCCTCTGTACAGAAACTGGCCTCTCTCTAGGACATGGTCCCAATCCTCTGGACATAAACTGGCCCCTCTTGGACATGGTCCCAATCCTCTGGACAGAAACTGGGCCCTCTCTAGGACATGGTCCCAATCCTCTGGACATAAACTTGCCCCTCACTAGGACATGGTCCCAATCCTCTGGACATAAACTTGCCCCTCACTAGGACATGGTCCCAATCCTCTGGACATAAACTGACCCCTCTCTAGGACATGGTCCCAATCCTCTGGACATAAACTTGCCCCTCTCTAGGACATGATGGACATCAACAGCAAATGGACAGCAAAGAAAATAAATTCCCCTCTCTGATCTTTGACCCATTCTTCTGGACTAGATCATTTCCCCTCTCTGATCTTTGACCCATTCTTCTGGACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383760 True 1176 lncRNA 0.49 4 42887479 42888954

Neighbor

gene id symbol gene type direction distance location
LOC110508074 sh2b2 coding upstream 15993 42837245 ~ 42871486 (+)
cux1b LOC106581515 coding upstream 70721 42666657 ~ 42816758 (+)
LOC110508057 LOC106581503 coding upstream 258241 42574582 ~ 42629238 (+)
LOC110508059 LOC106581491 coding upstream 371916 42510819 ~ 42515563 (+)
LOC110507283 LOC106581492 coding upstream 384006 42502542 ~ 42503473 (+)
LOC110508072 LOC105005600 coding downstream 2005 42890959 ~ 43081678 (+)
LOC110508071 LOC106603399 coding downstream 104740 42993694 ~ 42996810 (+)
LOC118944686 NA coding downstream 202195 43091149 ~ 43092189 (+)
LOC110508068 aldh3a2 coding downstream 207689 43096643 ~ 43111668 (+)
LOC110508067 LOC106581512 coding downstream 222843 43111797 ~ 43143108 (+)
G2084610 NA non-coding upstream 5522 42880777 ~ 42881957 (+)
G2084598 NA non-coding upstream 20691 42865224 ~ 42866788 (+)
G2084576 NA non-coding upstream 66523 42820694 ~ 42820956 (+)
G2084575 NA non-coding upstream 66808 42820329 ~ 42820671 (+)
G2084525 NA non-coding upstream 85490 42799702 ~ 42801989 (+)
G2084618 NA non-coding downstream 21615 42910569 ~ 42911037 (+)
G2084625 LOC100136012 non-coding downstream 40988 42929942 ~ 43010963 (+)
G2084638 NA non-coding downstream 99384 42988338 ~ 42990174 (+)
G2084647 NA non-coding downstream 126527 43015481 ~ 43018097 (+)
G2084156 NA other upstream 625842 42260523 ~ 42261637 (+)
G2083851 NA other upstream 775443 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1380306 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1674707 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1902625 40981370 ~ 40984854 (+)
G2084659 NA other downstream 174334 43063288 ~ 43064257 (+)
G2085037 NA other downstream 643316 43532270 ~ 43532578 (+)
G2085122 NA other downstream 843441 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1229269 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1519099 44408053 ~ 44410050 (+)

Expression


Co-expression Network