G2084638


Basic Information

Item Value
gene id G2084638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42988338 ~ 42990174 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383801
cctctctctctccccccctctctctctctctccccctctcaatgACAGAGTTAAGATGGTGTCATGGCAGCGGAAGTCGTTCCCATTTTCCCTAACTGCTGAATCAATCCCAGCTGGGCCCTGTAATAGCCAGGGCTATTGAGTGTCTGACCCAGCTGCCTCCTAGCTAGCTgcctcccagtcccagctcacgCCGGCAGAGATAGAAAAGCCGTAGGAGAACAAGCACATTGAGATACACATTGACtgagtgatacatttattaattcATGTCTTGTCTGTTGTGCTGTGGCAATGGAGGCCAGGGTGTAGTGGTGCTACTTGGGTTTGGGTGTGATTGAACTGTCAGTGGAGGAAGCAGcccctcaagaggctgaaaatTATTTGGCATGGgcactcagatcctcaaaatgttttacagctggtatggcaactgcctgGCATCTAACCGCAAGCGTGTCATGCAGCATTTGAGATGCTactctacaggactgttttgctagcacagattggaatatgttcagggattcttccgatggcattgaggagtacaccacatcagtcaccggcttcatcaataagtgcatagacgacgtcgtccccacattgACTGTACGTACTTATCCCAGCCAGAAGTCATGGATGACAGGAAACatctgcaccgagctaaaggctagaaccatcaaacaggcaaggcgtcaatacaggactaagattgaatcctactacaccagactacaaaaggaaacccagccgcgagctgcccagtgacgtgagcctaccagactagctaaatgccttttatgctcgcttcgaggcaagcaacactgaagcatgcatgagagcaccagctgttctggacgactgtgtgctCACACTCCACATAGtagatgtgagcaagacctttaaacaggtcaacattcacaaggccgcagagccagacggattaccaggacgtgtactcagagcatggaCAGACCAAGTgtgttcactgacattttcaacctctccctgaacgAGTCTGTTATACATACATGTTTCAAGcggaccaccatagttcctgcgCCCAAGATGCAAAGTTAACCTGCGTAAAATGACtgccgccccatagcactcactttggtagccatgaagtgctttgaaaggctggttatgactcacatcaacaccatcatcccagaaaccctagtcccactccaatttgtatcctgccccaacagatccacagacgacgcaagctcaatcacactccacactgccctttcccacctggacaaaaataacacttatgtgaaaatgctgttcattgactacttctcagcgttcaacaccgtagtgcccACAATGCTCAACACtatggtctagggcactgcattgcagcgctagctgtgccaccagagactctgggttcgcgcccaggctctgtcgcagccggccgcgaccgggaggtccgtggggtgacgcacaattggcctagcgtcgtccgggttagggagtgtttagccggtagggatatccttgtctcatcgcgcaccagtgactcctgtggcgggccgggcgcagtgtgcgctaaccaaggtggccaggtgcactgtgtttcctccaacaacattggtgcggctggcttccgggttggaggtgcgctgtgttaagaagcagtgtggcttggttgggttgtgtttcgccCGTACGGGAGCGAtgagatagtaattactaacaactggataccacgaaattggggagaaaaaggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383801 True 1753 lncRNA 0.52 2 42988338 42990174

Neighbor

gene id symbol gene type direction distance location
LOC110508074 sh2b2 coding upstream 116852 42837245 ~ 42871486 (+)
cux1b LOC106581515 coding upstream 171580 42666657 ~ 42816758 (+)
LOC110508057 LOC106581503 coding upstream 359100 42574582 ~ 42629238 (+)
LOC110508059 LOC106581491 coding upstream 472775 42510819 ~ 42515563 (+)
LOC110507283 LOC106581492 coding upstream 484865 42502542 ~ 42503473 (+)
LOC110508071 LOC106603399 coding downstream 3520 42993694 ~ 42996810 (+)
LOC118944686 NA coding downstream 100975 43091149 ~ 43092189 (+)
LOC110508068 aldh3a2 coding downstream 106469 43096643 ~ 43111668 (+)
LOC110508067 LOC106581512 coding downstream 121623 43111797 ~ 43143108 (+)
LOC118944687 NA coding downstream 200603 43190777 ~ 43218309 (+)
G2084618 NA non-coding upstream 77301 42910569 ~ 42911037 (+)
G2084608 NA non-coding upstream 99384 42887479 ~ 42888954 (+)
G2084610 NA non-coding upstream 106381 42880777 ~ 42881957 (+)
G2084598 NA non-coding upstream 121550 42865224 ~ 42866788 (+)
G2084576 NA non-coding upstream 167382 42820694 ~ 42820956 (+)
G2084647 NA non-coding downstream 25307 43015481 ~ 43018097 (+)
G2084660 NA non-coding downstream 74722 43064896 ~ 43065541 (+)
G2084604 NA non-coding downstream 92837 43083011 ~ 43085654 (+)
G2084675 NA non-coding downstream 153622 43143796 ~ 43144844 (+)
G2084156 NA other upstream 726701 42260523 ~ 42261637 (+)
G2083851 NA other upstream 876302 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1481165 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1775566 41212204 ~ 41212772 (+)
G2083005 NA other upstream 2003484 40981370 ~ 40984854 (+)
G2084659 NA other downstream 73114 43063288 ~ 43064257 (+)
G2085037 NA other downstream 542096 43532270 ~ 43532578 (+)
G2085122 NA other downstream 742221 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1128049 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1417879 44408053 ~ 44410050 (+)

Expression


Co-expression Network