G2084647


Basic Information

Item Value
gene id G2084647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43015481 ~ 43018097 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383811
tccactaaccctaactcatacagtccaatagaatataggttatattccactaaccctaactcatacagtccaatataatataggttatattccactatccactaaccctaactcatacagtccaatagaatataggatatattccactaaccctaactcatacagtccaatagaatataggttatattccactaaccctaactcatacagtccaatagaatataggttatattccactatccactaaccctaactcatacagtccaatagaatataggttatattccactatccactaacccgaactcatacagtccaatagaatataggttatattccactaaccctaactcatacagtccaatagaatataggatatattccactaaccctaactcatacagtccaatataatataggatatattcc

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383811 True 429 lncRNA 0.34 2 43015481 43018097

Neighbor

gene id symbol gene type direction distance location
LOC110508071 LOC106603399 coding upstream 19018 42993694 ~ 42996810 (+)
LOC110508074 sh2b2 coding upstream 143995 42837245 ~ 42871486 (+)
cux1b LOC106581515 coding upstream 198723 42666657 ~ 42816758 (+)
LOC110508057 LOC106581503 coding upstream 386243 42574582 ~ 42629238 (+)
LOC110508059 LOC106581491 coding upstream 499918 42510819 ~ 42515563 (+)
LOC118944686 NA coding downstream 73052 43091149 ~ 43092189 (+)
LOC110508068 aldh3a2 coding downstream 78546 43096643 ~ 43111668 (+)
LOC110508067 LOC106581512 coding downstream 93700 43111797 ~ 43143108 (+)
LOC118944687 NA coding downstream 172680 43190777 ~ 43218309 (+)
LOC110508082 LOC106613355 coding downstream 175418 43193515 ~ 43293841 (+)
G2084625 LOC100136012 non-coding upstream 4518 42929942 ~ 43010963 (+)
G2084638 NA non-coding upstream 25307 42988338 ~ 42990174 (+)
G2084618 NA non-coding upstream 104444 42910569 ~ 42911037 (+)
G2084608 NA non-coding upstream 126527 42887479 ~ 42888954 (+)
G2084660 NA non-coding downstream 46799 43064896 ~ 43065541 (+)
G2084604 NA non-coding downstream 64914 43083011 ~ 43085654 (+)
G2084675 NA non-coding downstream 125699 43143796 ~ 43144844 (+)
G2084902 NA non-coding downstream 165037 43183134 ~ 43183334 (+)
G2084916 NA non-coding downstream 180925 43199022 ~ 43199230 (+)
G2084156 NA other upstream 753844 42260523 ~ 42261637 (+)
G2083851 NA other upstream 903445 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1508308 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1802709 41212204 ~ 41212772 (+)
G2083005 NA other upstream 2030627 40981370 ~ 40984854 (+)
G2084659 NA other downstream 45191 43063288 ~ 43064257 (+)
G2085037 NA other downstream 514173 43532270 ~ 43532578 (+)
G2085122 NA other downstream 714298 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1100126 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1389956 44408053 ~ 44410050 (+)

Expression


Co-expression Network