G2084604


Basic Information

Item Value
gene id G2084604
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43083011 ~ 43085654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383753
taatattatgtAATATAATCTTATAACATAATCATATTTAATATTATGtaatatgtaaatattatattaCGTGTGATAATGATGAGGTCAGTAAACCTGGACATTCTGCCCCTCTCACTGGGTTCCATAGACCCTAACTCACAACACTGGGTTCCATAGACCCTAACTCACAACACTTGCATGGTTTATTTCAAGATACGGTGACGTTATGTGTTCTGTGGAAAACAGAACAGGATGTGGATGTGGGTTTGGTCGTTGCTCatgggcagtggtggaaaaagaacCCGCTTGTCATACTTGAGCAAAAGAAAAGATACctgaatagaaaatgactcaagtaaaagtgaaagtcacccagtaaaatactacttgagtaaaaagtctaaaagtatttggttttaaatgtacttaagtatcacaagtataaatcatttaaaatgtcGTATATTAAGTAAACTAGACGACaccattttcttttctttttattaCATTTATGGATAGCTATGGGCagactccaacacttagacatcatttactgacaaagcatttgtgtttagtgagtctgccagatcagaggccgtagggatgaccagggatgtcctcttgataagtgcgtgaattagacaatttccTGTCCTTGctaaagcattaaacatgtaacgagtacttttgggtttcgggggaaaatgtaaggagtaaaaagtatattttctttaggaatgtagtggagtaaaagtcaaaagttgtcaaaaatataaatactaaagtaaactacagatacccccaaaaaaactacttaagtagtacttcaagtatttttacttaagtgcgTTGCACCACTGCTCGTGGTATTGCAGTTCCTGGCAAGGAGTCAGTATTTTTATAATTTGTTCTATTTATGATGTCACATCCTATTCTGGAAGGTCAAGACCCTCATTTTAACTATCAACATCACGGTATCCCATAATGCCTTACCTACTGTACAATACTGCCTGATGAattccagtgttgtgtttgtgtgtgtgtgtgtgtgtgtgagagagagagagagagcattttaATGTCTGaaccaatgtttttttgtgtacAAAGTGTATATGATTTCTCTGAGGAATAGCATCTACCACTGCCAATGATTGTAAATATGCTGTTGAGATGGAGTCTAGATGGTTGGTCTCTATTTGTTCTGCTCTGTGAACCCTGTTATTTTATGTTCTTCTTGAACTGCTTTTGAGCTTTAACAAAAATACTGGGATTCATTCAAACCCACCATAGCAATGTTTAGGCAATGTCTTTATTTACAATATTAATCTCGTGTACACACACTTCTAATTCTGAAACGTGAAAGCATATCTGCTAGTAGTTAGCTTACCTGCTAGTAGTTAGCATACCTGCTAGTAGTTAGCATACCTGCTAGTAGTTAGCATACCTGCTAGGTTTTTATACAGTCCCCAAGACCAATCTGAGTTTATTTGACCatttggagagagaaaaaagctaCTGTGTAAATACTGCAATGTGGGTTTGATTGAATTGAGCCCCAGATATTTTGTCCTACCATGCTACTCAGTTCTGTTCGGTTGGTCTGTGAGGGAGAAAATAGATCACAAACAAACCACAGCCATGATGCCTACTCAACGTGTTGCCTTGGTGTTGTGATGCTGTGTTTTGCTTTTGTTACTGACATTATTAAGTAAAGTTTGTCCGTACGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383753 True 1714 lncRNA 0.37 2 43083011 43085654

Neighbor

gene id symbol gene type direction distance location
LOC110508072 LOC105005600 coding upstream 1333 42890959 ~ 43081678 (+)
LOC110508071 LOC106603399 coding upstream 86548 42993694 ~ 42996810 (+)
LOC110508074 sh2b2 coding upstream 211525 42837245 ~ 42871486 (+)
cux1b LOC106581515 coding upstream 266253 42666657 ~ 42816758 (+)
LOC110508057 LOC106581503 coding upstream 453773 42574582 ~ 42629238 (+)
LOC118944686 NA coding downstream 5495 43091149 ~ 43092189 (+)
LOC110508068 aldh3a2 coding downstream 10989 43096643 ~ 43111668 (+)
LOC110508067 LOC106581512 coding downstream 26143 43111797 ~ 43143108 (+)
LOC118944687 NA coding downstream 105123 43190777 ~ 43218309 (+)
LOC110508082 LOC106613355 coding downstream 107861 43193515 ~ 43293841 (+)
G2084660 NA non-coding upstream 17470 43064896 ~ 43065541 (+)
G2084647 NA non-coding upstream 64914 43015481 ~ 43018097 (+)
G2084625 LOC100136012 non-coding upstream 72048 42929942 ~ 43010963 (+)
G2084638 NA non-coding upstream 92837 42988338 ~ 42990174 (+)
G2084675 NA non-coding downstream 58142 43143796 ~ 43144844 (+)
G2084902 NA non-coding downstream 97480 43183134 ~ 43183334 (+)
G2084916 NA non-coding downstream 113368 43199022 ~ 43199230 (+)
G2084920 NA non-coding downstream 126101 43211755 ~ 43211958 (+)
G2084923 NA non-coding downstream 133352 43219006 ~ 43219267 (+)
G2084659 NA other upstream 18754 43063288 ~ 43064257 (+)
G2084156 NA other upstream 821374 42260523 ~ 42261637 (+)
G2083851 NA other upstream 970975 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1575838 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1870239 41212204 ~ 41212772 (+)
G2085037 NA other downstream 446616 43532270 ~ 43532578 (+)
G2085122 NA other downstream 646741 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1032569 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1322399 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 2400983 45480328 ~ 45487737 (+)

Expression


Co-expression Network