G2084675


Basic Information

Item Value
gene id G2084675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43143796 ~ 43144844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383845
TCAGCGTTGTTTTTATTCTCCTGCTGCACTTGGTAGCCCTGCCTGGTCTGTACAATAATGTCAATTCGATCTTTATTGTCCATTTCTGGACGTGCCTTTTGTGTCTCTCCTGCAACAGTTGCACACACCCCAGGTTCCATCCCAAATTACATACTATTCCCGATATGGTGCACTACTCTTgaacagggcctatagggctctatCTTTTATTAGCATCACTAAATagtatatatttaagcaatacggcccaagggggtgtggtatatggctaatataccacagctaacgtctgttcttaggcacgacgcaacgcagagtgcctgcaTACATctattagccgtggtatattagccatataccacaaatcctgaggtgtcttattgcacttataaactggttaccagcatacacagaacagtaaacaagtagttttgcgtcatacctgtggtatatttaagcaataaggcacgagggggtgtggtatatggccaatataccacggctaagggctgttcttaggcaaaacCGCAACGCACCGCACCGCaatgtgccttattgctgttataaactggttaccaacgtaattaaagcagtaaaaatacatgttttttcatacccgtggtatatggtctgatataccacggctgtcagccaatcagcatgcagGACTCAAACTACCCTGTTTATAATACTAATTTAGGTCATTACCTAAGGTTCAGACTGTAGAACCTTAGGATTGGGTTTGTTTTTTACCCAGAGTTTATACACAGTACTGTGTTTAGGCTGTTACAAATTATTATATATTAAACACCAGGTGGCAGCAGAGAGCTGCTCTGATTTTACAAATCCGTTATCATAAATAACCACCCTGTTACATGCTCTTGGATGACTTTCTCTCCTCAGCCATCTAATAGCCTGGTGGTTAATGCTGGTGAATACAGCCAGGCATTATGGAGTAATTGTTCACTCACTGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383845 True 975 lncRNA 0.42 2 43143796 43144844

Neighbor

gene id symbol gene type direction distance location
LOC110508067 LOC106581512 coding upstream 688 43111797 ~ 43143108 (+)
LOC110508068 aldh3a2 coding upstream 32128 43096643 ~ 43111668 (+)
LOC118944686 NA coding upstream 51607 43091149 ~ 43092189 (+)
LOC110508072 LOC105005600 coding upstream 62118 42890959 ~ 43081678 (+)
LOC110508071 LOC106603399 coding upstream 147333 42993694 ~ 42996810 (+)
LOC118944687 NA coding downstream 45933 43190777 ~ 43218309 (+)
LOC110508082 LOC106613355 coding downstream 48671 43193515 ~ 43293841 (+)
LOC110508093 ift20 coding downstream 404408 43549252 ~ 43557059 (+)
usp32 LOC106581527 coding downstream 428492 43573336 ~ 43700703 (+)
si:ch211-167j9.5 LOC106581520 coding downstream 556717 43701561 ~ 43728339 (+)
G2084604 NA non-coding upstream 58142 43083011 ~ 43085654 (+)
G2084660 NA non-coding upstream 78255 43064896 ~ 43065541 (+)
G2084647 NA non-coding upstream 125699 43015481 ~ 43018097 (+)
G2084625 LOC100136012 non-coding upstream 132833 42929942 ~ 43010963 (+)
G2084902 NA non-coding downstream 38290 43183134 ~ 43183334 (+)
G2084916 NA non-coding downstream 54178 43199022 ~ 43199230 (+)
G2084920 NA non-coding downstream 66911 43211755 ~ 43211958 (+)
G2084923 NA non-coding downstream 74162 43219006 ~ 43219267 (+)
G2084925 NA non-coding downstream 77602 43222446 ~ 43223063 (+)
G2084659 NA other upstream 79539 43063288 ~ 43064257 (+)
G2084156 NA other upstream 882159 42260523 ~ 42261637 (+)
G2083851 NA other upstream 1031760 41971259 ~ 42112036 (+)
LOC110507232 LOC106593204 other upstream 1636623 41485189 ~ 41507173 (+)
G2083239 NA other upstream 1931024 41212204 ~ 41212772 (+)
G2085037 NA other downstream 387426 43532270 ~ 43532578 (+)
G2085122 NA other downstream 587551 43732395 ~ 43733894 (+)
G2085314 NA other downstream 973379 44118223 ~ 44119239 (+)
G2085969 NA other downstream 1263209 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 2341793 45480328 ~ 45487737 (+)

Expression


Co-expression Network