Gene
RNA
| Item | Value |
|---|---|
| gene id | G2085078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 43587876 ~ 43589316 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2384376 | False | 362 | lncRNA | 0.50 | 3 | 43587876 | 43589316 |
| TU2384375 | True | 306 | lncRNA | 0.50 | 2 | 43588805 | 43589316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508093 | ift20 | coding | upstream | 30817 | 43549252 ~ 43557059 (+) |
| LOC110508082 | LOC106613355 | coding | upstream | 294035 | 43193515 ~ 43293841 (+) |
| LOC118944687 | NA | coding | upstream | 369567 | 43190777 ~ 43218309 (+) |
| LOC110508067 | LOC106581512 | coding | upstream | 444768 | 43111797 ~ 43143108 (+) |
| LOC110508068 | aldh3a2 | coding | upstream | 476208 | 43096643 ~ 43111668 (+) |
| si:ch211-167j9.5 | LOC106581520 | coding | downstream | 112245 | 43701561 ~ 43728339 (+) |
| sult3st1 | LOC106581508 | coding | downstream | 189756 | 43779072 ~ 43799038 (+) |
| LOC110508083 | LOC106581524 | coding | downstream | 211786 | 43801102 ~ 43844791 (+) |
| LOC110508084 | LOC105012849 | coding | downstream | 283810 | 43873126 ~ 44069585 (+) |
| LOC118944688 | NA | coding | downstream | 307231 | 43896547 ~ 43898559 (+) |
| G2085041 | NA | non-coding | upstream | 48219 | 43539457 ~ 43539657 (+) |
| G2085038 | NA | non-coding | upstream | 53780 | 43533823 ~ 43534096 (+) |
| G2085025 | NA | non-coding | upstream | 80769 | 43501114 ~ 43507107 (+) |
| G2084988 | NA | non-coding | upstream | 201811 | 43385622 ~ 43386065 (+) |
| G2084986 | NA | non-coding | upstream | 204553 | 43382792 ~ 43383323 (+) |
| G2085080 | NA | non-coding | downstream | 1864 | 43591180 ~ 43593471 (+) |
| G2085108 | NA | non-coding | downstream | 115482 | 43704798 ~ 43705267 (+) |
| G2085124 | NA | non-coding | downstream | 146000 | 43735316 ~ 43735541 (+) |
| G2085125 | NA | non-coding | downstream | 146541 | 43735857 ~ 43736158 (+) |
| G2085126 | LOC106581526 | non-coding | downstream | 149823 | 43739139 ~ 43743757 (+) |
| G2085037 | NA | other | upstream | 55298 | 43532270 ~ 43532578 (+) |
| G2084659 | NA | other | upstream | 523619 | 43063288 ~ 43064257 (+) |
| G2084156 | NA | other | upstream | 1326239 | 42260523 ~ 42261637 (+) |
| G2083851 | NA | other | upstream | 1475840 | 41971259 ~ 42112036 (+) |
| LOC110507232 | LOC106593204 | other | upstream | 2080703 | 41485189 ~ 41507173 (+) |
| G2085122 | NA | other | downstream | 143079 | 43732395 ~ 43733894 (+) |
| G2085314 | NA | other | downstream | 528907 | 44118223 ~ 44119239 (+) |
| G2085969 | NA | other | downstream | 818737 | 44408053 ~ 44410050 (+) |
| LOC110508103 | LOC106581548 | other | downstream | 1897321 | 45480328 ~ 45487737 (+) |
| mtus2b | LOC106593344 | other | downstream | 1940140 | 45493223 ~ 45664305 (+) |
