G2085167


Basic Information

Item Value
gene id G2085167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43841621 ~ 43842239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384485
TTACTATAGTTAATGtttcattattctacaatgtagaaaatagtaaaaaaaaataaagaaaaaccctggaatgagtagctgtgtccaaaagtatgtggacaccccttcaaatgagtggattgggttatttcagccacacccaatgctaacaggtgtataaaattgagcacacagccacgcAATCTCCAACATGGGcagtataatggccttactgaagagctcagtgactttcaaagtggcaccatCATATTCTGTAATATTCTTGAGTTTATGTCAATCAGGAATGGAAACGGGCTCTATAGACCTCAATACGAGTGACTGAGCCAAAACACACCTGTTATGTTGGGCACCTACAGACAAAAAAAACATGCTATGAAATACACACACAgcgtacaaaatattaggaacacctgctctttccatgacatagactgaccaggtgaatccaggtgagatctatgatcccttattgatgtcacttgttaaatccacttcaattagtgtagaagaagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384485 True 515 lncRNA 0.39 2 43841621 43842239

Neighbor

gene id symbol gene type direction distance location
sult3st1 LOC106581508 coding upstream 42583 43779072 ~ 43799038 (+)
si:ch211-167j9.5 LOC106581520 coding upstream 113282 43701561 ~ 43728339 (+)
usp32 LOC106581527 coding upstream 140918 43573336 ~ 43700703 (+)
LOC110508093 ift20 coding upstream 284562 43549252 ~ 43557059 (+)
LOC110508082 LOC106613355 coding upstream 547780 43193515 ~ 43293841 (+)
LOC110508084 LOC105012849 coding downstream 30887 43873126 ~ 44069585 (+)
LOC118944688 NA coding downstream 54308 43896547 ~ 43898559 (+)
zgc:110333 LOC106581535 coding downstream 246352 44088591 ~ 44090215 (+)
cldn8 LOC106581534 coding downstream 253205 44095444 ~ 44098036 (+)
LOC110507242 NA coding downstream 257810 44100049 ~ 44101891 (+)
G2085137 NA non-coding upstream 86767 43754367 ~ 43754854 (+)
G2085126 LOC106581526 non-coding upstream 97864 43739139 ~ 43743757 (+)
G2085125 NA non-coding upstream 105463 43735857 ~ 43736158 (+)
G2085124 NA non-coding upstream 106080 43735316 ~ 43735541 (+)
G2085108 NA non-coding upstream 136354 43704798 ~ 43705267 (+)
G2085175 NA non-coding downstream 15680 43857919 ~ 43858227 (+)
G2085178 NA non-coding downstream 29924 43872163 ~ 43872432 (+)
G2085205 NA non-coding downstream 60616 43902855 ~ 43903416 (+)
G2085225 NA non-coding downstream 91419 43933658 ~ 43933987 (+)
G2085242 NA non-coding downstream 127413 43969652 ~ 43969931 (+)
G2085122 NA other upstream 107727 43732395 ~ 43733894 (+)
G2085037 NA other upstream 309043 43532270 ~ 43532578 (+)
G2084659 NA other upstream 777364 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1579984 42260523 ~ 42261637 (+)
G2083851 NA other upstream 1729585 41971259 ~ 42112036 (+)
G2085314 NA other downstream 275984 44118223 ~ 44119239 (+)
G2085969 NA other downstream 565814 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 1644398 45480328 ~ 45487737 (+)
mtus2b LOC106593344 other downstream 1687217 45493223 ~ 45664305 (+)
G2087149 NA other downstream 1954860 45797099 ~ 45798593 (+)

Expression


Co-expression Network