G2085225


Basic Information

Item Value
gene id G2085225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43933658 ~ 43933987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384554
AGCTCCAGACGTGTTCTATTGTCTAGGTCAGTGTTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTGTTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTATTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTGTTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTGTTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTATTGGATCAGCTCCAGACGTGTTCTATTGTCTAGGTCAGTATTGGATCAGCTCCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384554 True 290 lncRNA 0.47 2 43933658 43933987

Neighbor

gene id symbol gene type direction distance location
LOC118944688 NA coding upstream 35099 43896547 ~ 43898559 (+)
LOC110508083 LOC106581524 coding upstream 88867 43801102 ~ 43844791 (+)
sult3st1 LOC106581508 coding upstream 134620 43779072 ~ 43799038 (+)
si:ch211-167j9.5 LOC106581520 coding upstream 205319 43701561 ~ 43728339 (+)
usp32 LOC106581527 coding upstream 232955 43573336 ~ 43700703 (+)
zgc:110333 LOC106581535 coding downstream 154604 44088591 ~ 44090215 (+)
cldn8 LOC106581534 coding downstream 161457 44095444 ~ 44098036 (+)
LOC110507242 NA coding downstream 166062 44100049 ~ 44101891 (+)
LOC110508097 LOC105006673 coding downstream 177563 44111550 ~ 44232823 (+)
cadm2b LOC106581539 coding downstream 934000 44867987 ~ 45361689 (+)
G2085205 NA non-coding upstream 30242 43902855 ~ 43903416 (+)
G2085178 NA non-coding upstream 61226 43872163 ~ 43872432 (+)
G2085175 NA non-coding upstream 75431 43857919 ~ 43858227 (+)
G2085153 NA non-coding upstream 78708 43784348 ~ 43854950 (+)
G2085167 NA non-coding upstream 91419 43841621 ~ 43842239 (+)
G2085242 NA non-coding downstream 35665 43969652 ~ 43969931 (+)
G2085250 NA non-coding downstream 59409 43993396 ~ 43994165 (+)
G2085275 NA non-coding downstream 104821 44038808 ~ 44041951 (+)
G2085278 NA non-coding downstream 107239 44041226 ~ 44042341 (+)
G2085280 NA non-coding downstream 117108 44051095 ~ 44051896 (+)
G2085122 NA other upstream 199764 43732395 ~ 43733894 (+)
G2085037 NA other upstream 401080 43532270 ~ 43532578 (+)
G2084659 NA other upstream 869401 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1672021 42260523 ~ 42261637 (+)
G2083851 NA other upstream 1821622 41971259 ~ 42112036 (+)
G2085314 NA other downstream 184236 44118223 ~ 44119239 (+)
G2085969 NA other downstream 474066 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 1552650 45480328 ~ 45487737 (+)
mtus2b LOC106593344 other downstream 1595469 45493223 ~ 45664305 (+)
G2087149 NA other downstream 1863112 45797099 ~ 45798593 (+)

Expression


Co-expression Network