G2085275


Basic Information

Item Value
gene id G2085275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44038808 ~ 44041951 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384609
gtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatataacctccacactgactctgtactggtaccccctgtatatagcctccacacggactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtgccccctgtatataacctccacactgactctgtaccggtaccccctgtatataacctccacactgactcggtactggtaccccctgtatatagcctccacactgactcggtactggtaccccctgtatatagcctccacactgactcggtactggtaccccctgtatataacctccacactgactcggtactggtaccccctgtatatagcctccacactgactcggtactggtaccccctgtatatagcctcaac
>TU2384610
gtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatataacctccacactgactctgtactggtaccccctgtatatagcctccacacggactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtgccccctgtatataacctccacactgactctgtaccggtaccccctgtatataacctccacactgactcggtactggtaccccctgtatatagcctccacactgactcggtactggtaccccctgtatataacctccacactgactcggtactggtaccccctgtatatagcctccacactgactcggtactggtaccccctgtatatagcctccacactgactctgtaccggtaccccctgtatatacagtgccttgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384609 False 420 lncRNA 0.53 3 44038808 44041951
TU2384610 True 424 lncRNA 0.53 2 44038808 44039426

Neighbor

gene id symbol gene type direction distance location
LOC118944688 NA coding upstream 140249 43896547 ~ 43898559 (+)
LOC110508083 LOC106581524 coding upstream 194017 43801102 ~ 43844791 (+)
sult3st1 LOC106581508 coding upstream 239770 43779072 ~ 43799038 (+)
si:ch211-167j9.5 LOC106581520 coding upstream 310469 43701561 ~ 43728339 (+)
usp32 LOC106581527 coding upstream 338105 43573336 ~ 43700703 (+)
zgc:110333 LOC106581535 coding downstream 46640 44088591 ~ 44090215 (+)
cldn8 LOC106581534 coding downstream 53493 44095444 ~ 44098036 (+)
LOC110507242 NA coding downstream 58098 44100049 ~ 44101891 (+)
LOC110508097 LOC105006673 coding downstream 69599 44111550 ~ 44232823 (+)
cadm2b LOC106581539 coding downstream 826036 44867987 ~ 45361689 (+)
G2085250 NA non-coding upstream 44643 43993396 ~ 43994165 (+)
G2085242 NA non-coding upstream 68877 43969652 ~ 43969931 (+)
G2085225 NA non-coding upstream 104821 43933658 ~ 43933987 (+)
G2085205 NA non-coding upstream 135392 43902855 ~ 43903416 (+)
G2085178 NA non-coding upstream 166376 43872163 ~ 43872432 (+)
G2085280 NA non-coding downstream 9144 44051095 ~ 44051896 (+)
G2085282 NA non-coding downstream 14792 44056743 ~ 44058020 (+)
G2085283 NA non-coding downstream 19856 44061807 ~ 44063145 (+)
G2085324 NA non-coding downstream 100586 44142537 ~ 44142949 (+)
G2085337 NA non-coding downstream 129332 44171283 ~ 44172182 (+)
G2085122 NA other upstream 304914 43732395 ~ 43733894 (+)
G2085037 NA other upstream 506230 43532270 ~ 43532578 (+)
G2084659 NA other upstream 974551 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1777171 42260523 ~ 42261637 (+)
G2083851 NA other upstream 1926772 41971259 ~ 42112036 (+)
G2085314 NA other downstream 76272 44118223 ~ 44119239 (+)
G2085969 NA other downstream 366102 44408053 ~ 44410050 (+)
LOC110508103 LOC106581548 other downstream 1444686 45480328 ~ 45487737 (+)
mtus2b LOC106593344 other downstream 1487505 45493223 ~ 45664305 (+)
G2087149 NA other downstream 1755148 45797099 ~ 45798593 (+)

Expression


Co-expression Network