G2085337


Basic Information

Item Value
gene id G2085337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44171283 ~ 44172182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384692
TGCAGTATGATGCAACTTTTAAAGAAGGAACCACCGCAACTTAACGTcccaataacatatcacacaacataacataacataacacaccatcacataacatatcacacaacacaacataacatcaCATAACAtatcacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacaCACCATCacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacacaacataacacaccatcacataacatatcacacaacataacataacataacacaccatcacataacatatcacacaacaCAGCATAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384692 True 545 lncRNA 0.35 2 44171283 44172182

Neighbor

gene id symbol gene type direction distance location
LOC110507242 NA coding upstream 69392 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 73247 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 81068 44088591 ~ 44090215 (+)
LOC110508084 LOC105012849 coding upstream 101698 43873126 ~ 44069585 (+)
cadm2b LOC106581539 coding downstream 695805 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 1271723 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1308146 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1321041 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1530983 45703165 ~ 45791795 (+)
G2085324 NA non-coding upstream 28334 44142537 ~ 44142949 (+)
G2085283 NA non-coding upstream 108138 44061807 ~ 44063145 (+)
G2085282 NA non-coding upstream 113263 44056743 ~ 44058020 (+)
G2085280 NA non-coding upstream 119387 44051095 ~ 44051896 (+)
G2085278 NA non-coding upstream 128942 44041226 ~ 44042341 (+)
G2085308 NA non-coding downstream 10461 44182643 ~ 44182909 (+)
G2085352 NA non-coding downstream 26870 44199052 ~ 44205726 (+)
G2085357 NA non-coding downstream 48596 44220778 ~ 44221142 (+)
G2085874 NA non-coding downstream 67306 44239488 ~ 44239838 (+)
G2085876 NA non-coding downstream 67701 44239883 ~ 44240150 (+)
G2085314 NA other upstream 52044 44118223 ~ 44119239 (+)
G2085122 NA other upstream 437389 43732395 ~ 43733894 (+)
G2085037 NA other upstream 638705 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1107026 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1909646 42260523 ~ 42261637 (+)
G2085969 NA other downstream 235871 44408053 ~ 44410050 (+)
G2087149 NA other downstream 1624917 45797099 ~ 45798593 (+)
G2087569 NA other downstream 2150902 46323084 ~ 46323694 (+)

Expression


Co-expression Network