G2085352


Basic Information

Item Value
gene id G2085352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44199052 ~ 44205726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384710
cctccgtagtctggtctccttccccaccagtaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctggtctccttcacccccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctc
>TU2384713
ccaccagtaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttctccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctggtctccttccccaccagcaggtaaactccctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttccccaccagcaggtaaacaccctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccactagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaacaccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctggtctccttccccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctttacccctgtagtctggtctccttcaccaccagtaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctggtctccttccccaccagcaggtaaactccctctgtagtctggtctccttccccaccagcaggtaaactccctctttacctctgtagtctggtctccttcaccaccagcaggtaaactccctctgtagtctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384710 False 206 lncRNA 0.53 2 44199052 44205726
TU2384713 True 1102 lncRNA 0.52 2 44199541 44202380

Neighbor

gene id symbol gene type direction distance location
LOC110507242 NA coding upstream 97161 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 101016 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 108837 44088591 ~ 44090215 (+)
LOC110508084 LOC105012849 coding upstream 129467 43873126 ~ 44069585 (+)
cadm2b LOC106581539 coding downstream 662261 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 1238179 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1274602 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1287497 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1497439 45703165 ~ 45791795 (+)
G2085308 NA non-coding upstream 16143 44182643 ~ 44182909 (+)
G2085337 NA non-coding upstream 26870 44171283 ~ 44172182 (+)
G2085324 NA non-coding upstream 56103 44142537 ~ 44142949 (+)
G2085283 NA non-coding upstream 135907 44061807 ~ 44063145 (+)
G2085282 NA non-coding upstream 141032 44056743 ~ 44058020 (+)
G2085357 NA non-coding downstream 15052 44220778 ~ 44221142 (+)
G2085874 NA non-coding downstream 33762 44239488 ~ 44239838 (+)
G2085876 NA non-coding downstream 34157 44239883 ~ 44240150 (+)
G2085877 NA non-coding downstream 34702 44240428 ~ 44240743 (+)
G2085879 NA non-coding downstream 36296 44242022 ~ 44242223 (+)
G2085314 NA other upstream 79813 44118223 ~ 44119239 (+)
G2085122 NA other upstream 465158 43732395 ~ 43733894 (+)
G2085037 NA other upstream 666474 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1134795 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1937415 42260523 ~ 42261637 (+)
G2085969 NA other downstream 202327 44408053 ~ 44410050 (+)
G2087149 NA other downstream 1591373 45797099 ~ 45798593 (+)
G2087569 NA other downstream 2117358 46323084 ~ 46323694 (+)

Expression


Co-expression Network