G2085877


Basic Information

Item Value
gene id G2085877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44240428 ~ 44240743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385373
gttcagtatattacgaTACCGTTTACCAGGGTCCTATGGTCCtgatcaaaactagtgcactatgtagagaatagggtgccattggggatgaAACCCTACCCTACAgaacccatctctttctctctctctttctctcctcgctctctttcctctctccccagttATTTTCTAACCAGTGCCAGTAGGGCTTTATGGTTTGACATGTAGAGCTTTTGGAGAATTGTTTTGCTTGTTTTGTTCCTTCTGTACAACTATTTCCACTGCTAAGTCCATCAGCGCTAACGGTTTATTTGTTAACTGTCCCGTTGTCTTTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385373 True 316 lncRNA 0.43 1 44240428 44240743

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 7605 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 138537 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 142392 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 150213 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 341869 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 627244 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 1203162 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1239585 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1252480 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1462422 45703165 ~ 45791795 (+)
G2085876 NA non-coding upstream 278 44239883 ~ 44240150 (+)
G2085874 NA non-coding upstream 590 44239488 ~ 44239838 (+)
G2085357 NA non-coding upstream 19286 44220778 ~ 44221142 (+)
G2085352 NA non-coding upstream 34702 44199052 ~ 44205726 (+)
G2085308 NA non-coding upstream 57519 44182643 ~ 44182909 (+)
G2085879 NA non-coding downstream 1279 44242022 ~ 44242223 (+)
G2085881 NA non-coding downstream 2271 44243014 ~ 44243216 (+)
G2085889 NA non-coding downstream 7404 44248147 ~ 44248363 (+)
G2085890 NA non-coding downstream 7688 44248431 ~ 44248651 (+)
G2085896 NA non-coding downstream 13913 44254656 ~ 44254879 (+)
G2085314 NA other upstream 121189 44118223 ~ 44119239 (+)
G2085122 NA other upstream 506534 43732395 ~ 43733894 (+)
G2085037 NA other upstream 707850 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1176171 43063288 ~ 43064257 (+)
G2084156 NA other upstream 1978791 42260523 ~ 42261637 (+)
G2085969 NA other downstream 167310 44408053 ~ 44410050 (+)
G2087149 NA other downstream 1556356 45797099 ~ 45798593 (+)
G2087569 NA other downstream 2082341 46323084 ~ 46323694 (+)

Expression


Co-expression Network