G2085973


Basic Information

Item Value
gene id G2085973
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44423851 ~ 44424709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385516
cgtgtgtgttgtgtgtgtgcagtgcgtgtgtgttgtgtgtgtgtgtttgtgttgtgtgtgcgtgtgtttgtgttgtgcgtttgcgtgcgtgtgtttgtgttgtgcgtgtgtgtgtttgtgtgcgtgcgtacgtgtttgtgtgcgtgcgtgtgtgtgtgtgttgtgtgtgtgtgtgtgtgtttgtatgctgaATTGTAAACGGAGGACAGTTAATTTGATGTTCCCTGGCCAACATTGTCTGGGGTAAGTGGAGCTCCAGGAGGATTTCAACAATGAGGTTTGTGTTATTGTCTACAGatagctgctataacagcctgcaGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGatggctgctataacagcctacagTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGATGGCTGGTATAACAGCCTGCAGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGATGGCTGCTATAACAGCCCGCAGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGatggctgctataacagcctacagTTCAGCTGTGAAGTATTGTAATCAATACAGGCTTTGTGAATAGGGGGAAGATTTAGGAAAACAGTCAATTCTGAAGCATTGAGCCG
>TU2385517
cgtgtgtgttgtgtgtgtgcagtgcgtgtgtgttgtgtgtgtgtgtttgtgttgtgtgtgcgtgtgtttgtgttgtgcgtttgcgtgcgtgtgtttgtgttgtgcgtgtgtgtgtttgtgtgcgtgcgtacgtgtttgtgtgcgtgcgtgtgtgtgtgtgttgtgtgtgtgtgtgtgtgtttgtatgctgaATTGTAAACGGAGGACAGTTAATTTGATGTTCCCTGGCCAACATTGTCTGGGGTAAGTGGAGCTCCAGGAGGATTTCAACAATGAGGTTTGTGTTATTGTCTACAGatagctgctataacagcctgcaGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGatggctgctataacagcctacagTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGATGGCTGGTATAACAGCCTGCAGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGATGGCTGCTATAACAGCCCGCAGTTCAGCTGTGAATGAGGTTTGTGTTATTGTCTACAGatggctgctataacagcctacagTTCAGCTGTGAAGTATTGTAATCAATACAGGCTTTGTGAATAGGGGGAAGATTTAGGAAAACAGTCAATTCTGAAGCATTGAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385516 False 642 lncRNA 0.45 4 44423851 44424709
TU2385517 True 642 lncRNA 0.45 3 44423851 44424709

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 191028 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 321960 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 325815 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 333636 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 525292 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 443278 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 1019196 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1055619 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1068514 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1278456 45703165 ~ 45791795 (+)
G2085970 NA non-coding upstream 9548 44412443 ~ 44414303 (+)
G2085945 NA non-coding upstream 58335 44364679 ~ 44365516 (+)
G2085911 NA non-coding upstream 60056 44360820 ~ 44363795 (+)
G2085944 NA non-coding upstream 65111 44358525 ~ 44358740 (+)
G2085924 NA non-coding upstream 126964 44292940 ~ 44296887 (+)
G2085974 NA non-coding downstream 13958 44438667 ~ 44441755 (+)
G2085976 NA non-coding downstream 15046 44439755 ~ 44440818 (+)
G2085978 NA non-coding downstream 19863 44444572 ~ 44445028 (+)
G2085979 NA non-coding downstream 21643 44446352 ~ 44447585 (+)
G2085987 NA non-coding downstream 40847 44465556 ~ 44466503 (+)
G2085969 NA other upstream 13801 44408053 ~ 44410050 (+)
G2085314 NA other upstream 304612 44118223 ~ 44119239 (+)
G2085122 NA other upstream 689957 43732395 ~ 43733894 (+)
G2085037 NA other upstream 891273 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1359594 43063288 ~ 43064257 (+)
G2087149 NA other downstream 1372390 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1898375 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 2069213 46493922 ~ 46499497 (+)

Expression


Co-expression Network