G2085978


Basic Information

Item Value
gene id G2085978
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44444572 ~ 44445028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385524
GTACCACATCACCCTCATCAATACAAGGAACACAGTCACAGGAGAAATCTTTCAGAAACGTTTCAGAAACGTACCACATCACCCTCATCAATACAAGGAACACAGTCACAGGAGAAACGTTTCAGAAACGTACCACATCACCCTCATCATTACACCGTCATCGATACTCAACCATGTCAGTTTTTGTTACTACCTATCCATCAACAGAAGCTTCATAGTAACACCGTGGACGAGCTTTATTTCTGTCCAAAAAAAAACGCATGTCGAAAACCACTGAGATAAATCGTCCAGTTTAAAAGGTATGGGAAGTCTCATGTTGAAATAGACATTGGTACAAGAGTGATTGGCAGTTTATTCCCTAACCTCCATCCCATCc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385524 True 376 lncRNA 0.41 2 44444572 44445028

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 211749 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 342681 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 346536 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 354357 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 546013 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 422959 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 998877 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 1035300 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 1048195 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1258137 45703165 ~ 45791795 (+)
G2085974 NA non-coding upstream 2817 44438667 ~ 44441755 (+)
G2085976 NA non-coding upstream 3754 44439755 ~ 44440818 (+)
G2085973 NA non-coding upstream 19863 44423851 ~ 44424709 (+)
G2085970 NA non-coding upstream 30269 44412443 ~ 44414303 (+)
G2085945 NA non-coding upstream 79056 44364679 ~ 44365516 (+)
G2085979 NA non-coding downstream 1324 44446352 ~ 44447585 (+)
G2085987 NA non-coding downstream 20528 44465556 ~ 44466503 (+)
G2085995 NA non-coding downstream 31559 44476587 ~ 44477255 (+)
G2086009 NA non-coding downstream 57358 44502386 ~ 44504169 (+)
G2086017 NA non-coding downstream 68794 44513822 ~ 44514178 (+)
G2085969 NA other upstream 34522 44408053 ~ 44410050 (+)
G2085314 NA other upstream 325333 44118223 ~ 44119239 (+)
G2085122 NA other upstream 710678 43732395 ~ 43733894 (+)
G2085037 NA other upstream 911994 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1380315 43063288 ~ 43064257 (+)
G2087149 NA other downstream 1352071 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1878056 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 2048894 46493922 ~ 46499497 (+)

Expression


Co-expression Network