G2086104


Basic Information

Item Value
gene id G2086104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44685095 ~ 44686853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385698
AAACCTCCAATTATATAAAAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGACACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGTAATAACAGCATCACAAGGGAAACAGATGGCAATAACAGCATCACAAGGGAAACAGATGGTAACAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCACAAGGGAAACAGATGGGTAAAAACAGCATCACAAGGGAAACAGATGGGTAATAACAGCATCAAAAGGGAAACAGATGGGTAATAACAgcataacagtgtgtgtgtgtgtgtgtgtgtgtcactctgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgctacaGTACTCACTGAAGTCTCCAGTAAGGAAAAGGGCCTCCGCGGCTGGGGCCCACTCCCTCAACACCAGTCTGTTGTCAGCCATGCGGTTCACGCCAAAGGTCCTGTAGCTTCTAGTGAACTGATCAAAGCCCCCTTCTGCCTCCTCCAGGAGGAACAGACGCTTCTC

Function

NR:

description
1,4-alpha-glucan-branching enzyme-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385698 True 815 lncRNA 0.45 2 44685095 44686853

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 452272 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 583204 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 587059 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 594880 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 786536 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 181134 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 757052 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 793475 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 806370 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1016312 45703165 ~ 45791795 (+)
G2086098 NA non-coding upstream 17801 44664410 ~ 44667294 (+)
G2086063 NA non-coding upstream 39532 44588189 ~ 44645563 (+)
G2086093 NA non-coding upstream 40502 44643661 ~ 44644593 (+)
G2086092 NA non-coding upstream 45149 44639401 ~ 44639946 (+)
G2086089 NA non-coding upstream 47247 44636747 ~ 44637848 (+)
G2086108 NA non-coding downstream 5993 44692846 ~ 44754521 (+)
G2086111 NA non-coding downstream 7284 44694137 ~ 44694917 (+)
G2086117 NA non-coding downstream 24667 44711520 ~ 44712921 (+)
G2086129 NA non-coding downstream 55555 44742408 ~ 44743850 (+)
G2086339 NA non-coding downstream 105081 44791934 ~ 44792878 (+)
G2085969 NA other upstream 275045 44408053 ~ 44410050 (+)
G2085314 NA other upstream 565856 44118223 ~ 44119239 (+)
G2085122 NA other upstream 951201 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1152517 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1620838 43063288 ~ 43064257 (+)
G2087149 NA other downstream 1110246 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1636231 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1807069 46493922 ~ 46499497 (+)

Expression


Co-expression Network