G2086358


Basic Information

Item Value
gene id G2086358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44820721 ~ 44820968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386078
GTAGATTTAATTGCCAATACAATCTCTTCTACAGAGAGCTGTTCTTCTAGTTCCGCAGCTGTCTCAGGTTcagctggggcggcagggtagcctggtggttagagtgtagaggcggcagggtagcctagtggttagagtgtagaggaggcagggtagcctggtggttagagtgtagaggcggcagggtagcctagtggttagagtgtagaggtggcagggtagcctagtggttagagtgtagaggtggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386078 True 248 lncRNA 0.54 1 44820721 44820968

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 587898 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 718830 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 722685 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 730506 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 922162 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 47019 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 622937 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 659360 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 672255 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 882197 45703165 ~ 45791795 (+)
G2086353 LOC106609167 non-coding upstream 5764 44807229 ~ 44814957 (+)
G2086352 NA non-coding upstream 20073 44800389 ~ 44800648 (+)
G2086350 NA non-coding upstream 21478 44799042 ~ 44799243 (+)
G2086342 NA non-coding upstream 27374 44793042 ~ 44793347 (+)
G2086339 NA non-coding upstream 27843 44791934 ~ 44792878 (+)
G2086364 NA non-coding downstream 9129 44830097 ~ 44831083 (+)
G2086376 NA non-coding downstream 38199 44859167 ~ 44859588 (+)
G2086395 NA non-coding downstream 77676 44898644 ~ 44901027 (+)
G2086401 NA non-coding downstream 86397 44907365 ~ 44927212 (+)
G2086405 NA non-coding downstream 90970 44911938 ~ 44913323 (+)
G2085969 NA other upstream 410671 44408053 ~ 44410050 (+)
G2085314 NA other upstream 701482 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1086827 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1288143 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1756464 43063288 ~ 43064257 (+)
G2087149 NA other downstream 976131 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1502116 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1672954 46493922 ~ 46499497 (+)

Expression


Co-expression Network