G2086395


Basic Information

Item Value
gene id G2086395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44898644 ~ 44901027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386123
agagagagtgagagacagagagagatagagagagagagagacagagagagagaaagatagaaagagagagagagggacagagaaagagagagagaggaagacagagagagacaaagatagagagacaaagagagagacaaagagagagagacaaagagagagagacaaagagagagagagatagaaagaaagagagagaaagacagagacagagagagcaaaagagagagacagagagcgatgcAACATGTATACTGGAGGAGTGTGAAGTCATATACTAGCCTGTTATAGTGCCAACCTGTTGACCATGTTCTGAGTACTGAGTGTTATAGTGCCAACCTGTTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATTTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTTAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTGAGTGTTATAGTGGCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTAAGTGTTATAGTGCCAATCTATTGACCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTAAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATTTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTTAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTAAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGACCATGTTCTGAGTGTTATAGTGCCAACCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTACTGAGTGTTATAGTGCCAACCTATTGATCATGTTCTGAGTGTTATAGTGCCAATCTATTGATCATGTTCTGAGTGTTATAGTGCC
>TU2386124
agagagagtgagagacagagagagatagagagagagagagacagagagagagaaagatagaaagagagagagagggacagagaaagagagagagaggaagacagagagagacaaagatagagagacaaagagagagacaaagagagagagacaaagagagagagacaaagagagagagagatagaaagaaagagagagaaagacagagacagagagagcaaaagagagagacagagagcgatgcAACATGTATACTGGAGGAGTGTGAAGTCATATACTAGCCTGTTATAGTGCCAACCTGTTGACCATGTTCTGAGTACTGAGTGTTATAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386123 False 1398 lncRNA 0.37 2 44898644 44900954
TU2386124 True 334 lncRNA 0.43 2 44898644 44901027

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 665821 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 796753 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 800608 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 808429 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1000085 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 542878 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 579301 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 592196 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 802138 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 875992 45776962 ~ 45777979 (+)
G2086376 NA non-coding upstream 39056 44859167 ~ 44859588 (+)
G2086364 NA non-coding upstream 67561 44830097 ~ 44831083 (+)
G2086358 NA non-coding upstream 77676 44820721 ~ 44820968 (+)
G2086353 LOC106609167 non-coding upstream 83687 44807229 ~ 44814957 (+)
G2086352 NA non-coding upstream 97996 44800389 ~ 44800648 (+)
G2086401 NA non-coding downstream 6338 44907365 ~ 44927212 (+)
G2086405 NA non-coding downstream 10911 44911938 ~ 44913323 (+)
G2086411 NA non-coding downstream 24173 44925200 ~ 44926027 (+)
G2086414 NA non-coding downstream 38898 44939925 ~ 44940341 (+)
G2086415 NA non-coding downstream 39223 44940250 ~ 44941850 (+)
G2085969 NA other upstream 488594 44408053 ~ 44410050 (+)
G2085314 NA other upstream 779405 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1164750 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1366066 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1834387 43063288 ~ 43064257 (+)
G2087149 NA other downstream 896072 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1422057 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1592895 46493922 ~ 46499497 (+)

Expression


Co-expression Network