G2086401


Basic Information

Item Value
gene id G2086401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44907365 ~ 44927212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386130
caaaaagataattacttgacacattggaaagaattaacaaaaaaacagagcaaactataatgctatttggccctaaacagagagtacacagcggcagaatacctgaccactgtgactgacccaaaattaaggaaagctttgactatgtacagactcagtgagcatagccttgctattgagaaaggccgccgtaggcagacatggctctcaagagaagacaggctatgtgctcactgagtctgtacatagtcaaagctttccttaattttgggtc

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386130 True 274 lncRNA 0.42 2 44907365 44927212

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 674542 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 805474 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 809329 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 817150 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1008806 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 516693 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 553116 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 566011 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 775953 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 849807 45776962 ~ 45777979 (+)
G2086395 NA non-coding upstream 6338 44898644 ~ 44901027 (+)
G2086376 NA non-coding upstream 47777 44859167 ~ 44859588 (+)
G2086364 NA non-coding upstream 76282 44830097 ~ 44831083 (+)
G2086358 NA non-coding upstream 86397 44820721 ~ 44820968 (+)
G2086353 LOC106609167 non-coding upstream 92408 44807229 ~ 44814957 (+)
G2086414 NA non-coding downstream 12713 44939925 ~ 44940341 (+)
G2086415 NA non-coding downstream 13038 44940250 ~ 44941850 (+)
G2086428 NA non-coding downstream 44248 44971460 ~ 44972470 (+)
G2086431 NA non-coding downstream 53911 44981123 ~ 44981953 (+)
G2086436 NA non-coding downstream 64279 44991491 ~ 44991937 (+)
G2085969 NA other upstream 497315 44408053 ~ 44410050 (+)
G2085314 NA other upstream 788126 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1173471 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1374787 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1843108 43063288 ~ 43064257 (+)
G2087149 NA other downstream 869887 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1395872 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1566710 46493922 ~ 46499497 (+)

Expression


Co-expression Network