G2086405


Basic Information

Item Value
gene id G2086405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44911938 ~ 44913323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386135
agagagcagaAGCACAAGGTTAAACCATCTTTTTTAACTGCTAATGAAACAATCCATCTTTGGCATTTCATATATTCCCTTATCACATTTCTGTTAATTGGGTTTCTCTTTGTAATATTATCCCACAGTTCAAtcctattcctcctctctctggccTGTAGTGAAGCCCACCCCCacaagagccacacacacacacacacacacacgcacgcacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacgaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcccacacacacaaacacacacacccacccacacacacacacgcacacacacacacacacacacacacacacacatgtctccTACTGACAGCCCTCACATCAACCACACCTCCTACAGACAGCCCTCACATCTCACACCAACCACGTCTCCTACCGACAGCCCTCACATCAACCACATTTTCTACTGACTGCCCTCACATCCCACACCAACCACGTCTCCCACTGACAgccctcacatcaacaacattttCTACTGACTGCCCTCACATCCCACACCAACCACGTCTCCTACTGACAGCCCTCACATCAACCACGTCTCCTACTGACAGCCCTCACATCAACCACACCTCCTACTGACAGCCCTCACATCAACCACACCTCCTACTGACAGCCCTCACATCCCACACCAACCACATTTCCTACTGACAACCCTCACATCAACCACGTCTCCTACTGACAGCCCTCACATCAACCACATCTCCTACTGACAGCCCTCACATCAACCACATCTCCTACTGACAGCCCTCACATCCCACACCAACCACATTTCCTACTGACAACCCTCACACCAACCACGTCTCCTACTGACAGCCCTCACATCAACCACATCTCCTACTGACAGCCCTCACATTAACCACGTCTCCTACTGACAGCCCTCACATCAACCAcacctgtttctgtctctctctctctctctgtatatgaaTATAGACAGTACCAGTTGGAGGTGAAACCCAACCAGGTGGAATGGTTCATGTCTCTTCTATAGGAAGTGAAACACAACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386135 True 1141 lncRNA 0.50 4 44911938 44913323

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 679115 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 810047 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 813902 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 821723 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1013379 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 530582 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 567005 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 579900 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 789842 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 863696 45776962 ~ 45777979 (+)
G2086395 NA non-coding upstream 10911 44898644 ~ 44901027 (+)
G2086376 NA non-coding upstream 52350 44859167 ~ 44859588 (+)
G2086364 NA non-coding upstream 80855 44830097 ~ 44831083 (+)
G2086358 NA non-coding upstream 90970 44820721 ~ 44820968 (+)
G2086353 LOC106609167 non-coding upstream 96981 44807229 ~ 44814957 (+)
G2086411 NA non-coding downstream 11877 44925200 ~ 44926027 (+)
G2086414 NA non-coding downstream 26602 44939925 ~ 44940341 (+)
G2086415 NA non-coding downstream 26927 44940250 ~ 44941850 (+)
G2086428 NA non-coding downstream 58137 44971460 ~ 44972470 (+)
G2086431 NA non-coding downstream 67800 44981123 ~ 44981953 (+)
G2085969 NA other upstream 501888 44408053 ~ 44410050 (+)
G2085314 NA other upstream 792699 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1178044 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1379360 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1847681 43063288 ~ 43064257 (+)
G2087149 NA other downstream 883776 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1409761 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1580599 46493922 ~ 46499497 (+)

Expression


Co-expression Network