G2086415


Basic Information

Item Value
gene id G2086415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44940250 ~ 44941850 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386150
tgaatctccctcagtcagactaacagaaccatggaggtgaatctccctcagtcagacagaaccatggagatgaatctccctcagtcagacagaaccatggaggtgaatctccctcagtcagactaacataaccatggaggtgaatctccctcagtcagactaacagaaccatggaggtgaatcttcctcagtcagacagaaccatggaggtgaatctccctcagtcagacagaaccatggtggtgaatcttcctcagtcatactaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386150 True 267 lncRNA 0.48 2 44940250 44941850

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 707427 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 838359 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 842214 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 850035 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1041691 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 502055 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 538478 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 551373 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 761315 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 835169 45776962 ~ 45777979 (+)
G2086401 NA non-coding upstream 13038 44907365 ~ 44927212 (+)
G2086411 NA non-coding upstream 14223 44925200 ~ 44926027 (+)
G2086405 NA non-coding upstream 26927 44911938 ~ 44913323 (+)
G2086395 NA non-coding upstream 39223 44898644 ~ 44901027 (+)
G2086376 NA non-coding upstream 80662 44859167 ~ 44859588 (+)
G2086428 NA non-coding downstream 29610 44971460 ~ 44972470 (+)
G2086431 NA non-coding downstream 39273 44981123 ~ 44981953 (+)
G2086436 NA non-coding downstream 49641 44991491 ~ 44991937 (+)
G2086498 NA non-coding downstream 146117 45087967 ~ 45088755 (+)
G2086502 NA non-coding downstream 153429 45095279 ~ 45095673 (+)
G2085969 NA other upstream 530200 44408053 ~ 44410050 (+)
G2085314 NA other upstream 821011 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1206356 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1407672 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1875993 43063288 ~ 43064257 (+)
G2087149 NA other downstream 855249 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1381234 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1552072 46493922 ~ 46499497 (+)

Expression


Co-expression Network