G2086428


Basic Information

Item Value
gene id G2086428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44971460 ~ 44972470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386165
TCAGTATGTATAATATTTAAGTTTTTGTGATATAAAGAGGGATTTACATTTAGTGCATTCATctaaagatagctaggtgagacaaccacatatcacagtgaggcaaccacatatcacagtgagacaaccacatatcacagtgagacaaccacatatcacagtgaaaccaccacatatcacagtgaaaccaccacatatcacagtgaaacaaccacatatcacagtgagacaaccacatatcacagtgaaacaaccacatatcacagtgaaaccaccacatatcacagtgagacaaccacatatcacagtgagacaaccacatatcacagtgagacaaccacatatcacagtgagacaaccacatatcacagtgagacaaccacatatcacaggatTCAaatattccattccagctaaacagtG

Function

NR:

description
PREDICTED: keratin-associated protein 5-4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386165 True 423 lncRNA 0.39 2 44971460 44972470

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 738637 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 869569 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 873424 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 881245 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1072901 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 471435 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 507858 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 520753 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 730695 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 804549 45776962 ~ 45777979 (+)
G2086415 NA non-coding upstream 29610 44940250 ~ 44941850 (+)
G2086414 NA non-coding upstream 31119 44939925 ~ 44940341 (+)
G2086401 NA non-coding upstream 44248 44907365 ~ 44927212 (+)
G2086411 NA non-coding upstream 45433 44925200 ~ 44926027 (+)
G2086405 NA non-coding upstream 58137 44911938 ~ 44913323 (+)
G2086431 NA non-coding downstream 8653 44981123 ~ 44981953 (+)
G2086436 NA non-coding downstream 19021 44991491 ~ 44991937 (+)
G2086498 NA non-coding downstream 115497 45087967 ~ 45088755 (+)
G2086502 NA non-coding downstream 122809 45095279 ~ 45095673 (+)
G2086509 NA non-coding downstream 137081 45109551 ~ 45109902 (+)
G2085969 NA other upstream 561410 44408053 ~ 44410050 (+)
G2085314 NA other upstream 852221 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1237566 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1438882 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1907203 43063288 ~ 43064257 (+)
G2087149 NA other downstream 824629 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1350614 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1521452 46493922 ~ 46499497 (+)

Expression


Co-expression Network