G2086498


Basic Information

Item Value
gene id G2086498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45087967 ~ 45088755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386241
CTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCACACTCTGTAAATCACACTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAATCACACTCTGTAAGTCACACTCTGTAAGTCGCACACTGTAAATCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCGCACACTGTAAATCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACACTGTAAGTGGCACTCTGTAAGTCACACTCTGTAAGTCACACTCTGTAAGTCACACtctgtaagtcgctctgaataaTTCTCTACTGAAATGTCAAATGTATTAGAGGTGTCGCTGTGTATGTACATACTTTAGTTATTAAGGTTCTGGATATTCCAGAGGAGTACCTCATAGCACTGGGGGAAGGGAATCTGGCGGTGAGTATAATTATAatggctcctctctctgtctctctctctctct

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386241 True 719 lncRNA 0.42 2 45087967 45088755

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 855144 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 986076 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 989931 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 997752 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 1189408 43896547 ~ 43898559 (+)
usp16 usp16 coding downstream 355150 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 391573 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 404468 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 614410 45703165 ~ 45791795 (+)
LOC118944695 NA coding downstream 688264 45776962 ~ 45777979 (+)
G2086436 NA non-coding upstream 96030 44991491 ~ 44991937 (+)
G2086431 NA non-coding upstream 106014 44981123 ~ 44981953 (+)
G2086428 NA non-coding upstream 115497 44971460 ~ 44972470 (+)
G2086415 NA non-coding upstream 146117 44940250 ~ 44941850 (+)
G2086414 NA non-coding upstream 147626 44939925 ~ 44940341 (+)
G2086502 NA non-coding downstream 6524 45095279 ~ 45095673 (+)
G2086509 NA non-coding downstream 20796 45109551 ~ 45109902 (+)
G2086526 NA non-coding downstream 55167 45143922 ~ 45146692 (+)
G2086532 NA non-coding downstream 79602 45168357 ~ 45170831 (+)
G2086545 NA non-coding downstream 115892 45204647 ~ 45204951 (+)
G2085969 NA other upstream 677917 44408053 ~ 44410050 (+)
G2085314 NA other upstream 968728 44118223 ~ 44119239 (+)
G2085122 NA other upstream 1354073 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1555389 43532270 ~ 43532578 (+)
G2084659 NA other upstream 2023710 43063288 ~ 43064257 (+)
G2087149 NA other downstream 708344 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1234329 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1405167 46493922 ~ 46499497 (+)

Expression


Co-expression Network